Conserved Protein Domain Family
Sema_2A

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cd11238: Sema_2A 
The Sema domain, a protein interacting module, of semaphorin 2A (Sema2A)
Sema2A, a secreted semaphorin, signals through its receptor plexin B (PlexB) to regulate central and peripheral axon pathfinding. In the Drosophila embryo, Sema2A secreted by oenocytes interacts with PlexB to guide sensory axons. Sema2A is a member of the semaphorin family of proteins. Semaphorins are regulatory molecules in the development of the nervous system and in axonal guidance. They also play important roles in other biological processes, such as angiogenesis, immune regulation, respiration systems and cancer. The Sema domain is located at the N-terminus and contains four disulfide bonds formed by eight conserved cysteine residues. It serves as a receptor-recognition and -binding module.
Statistics
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PSSM-Id: 200499
Aligned: 9 rows
Threshold Bit Score: 696.866
Created: 7-Apr-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative plexinputative
Feature 1:putative plexin binding site [polypeptide binding site]
Evidence:
  • Comment:based on the binding of semaphorins 6A and 4D to their receptor plexins A2 and B1, respectively

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                  ####                  
Q24323        66 LYYRTFHMNEDrdTLYVGAMDRVFRVNLQNISss-----nCNRDVINLEPTrdDVVSCVSKGKSqifDCKNHVRVIQSMD 140 fruit fly
XP_003136020  39 LAYRRLLLDPQsaSLYVGANGHLFRLWAYNINvtastdglYAHVELPVSPS--DAEECRRAGHA---ECINGVRLMFLKE 113 Loa loa
Q95XP4        34 GEFRELLIDPKagALFVGSEGAIFRLWAYNINdtg--envFAKKQLVLSES--EESECRSTASDe-rLCRPSTRFLAFTN 108 nematode
NP_001033952 120 LHYKTFYMDERnnALYVGAMDRIFRLNLRNISqs-----iCERDVLILEPTgsDILNCVSKGKRe-vECRNHIRVIQPMN 193 fruit fly
EFX80330     106 LYYRTSYLDAKr-STSAPCEDRVIRINLHNVSdt-----nCETDSLTLDPS--HVTNCISKGKSefyDCRNHVRVIQPMG 177 common water flea
EFV54168      63 LYYRVLLLDEDanALYVGAMNSFYKLNMNDINstl---lrDKFGEFELKPTteALALCSVRTRDqelKCQNHVKLVIKRS 139 Trichinella spi...
ADY41866      75 LFYRRLLLDAQsaSLYAGANGHLFKLWAYNINdttt-dnlYAHAELSVSRA--DADECRQNGHE---ECVNGVRLMFLKE 148 pig roundworm
XP_392426     70 LYYRTLYLDSKrdALYVGAMDKVFRLNLSNIShs-----nCERDALHLEPS--NVANCVSKGKSehfDCRNHIRVIQPMG 142 honey bee
XP_002402513  11 LYYRTFYMDRKreVLFVGGMDKVFRLNLANVNrt-----kCNDRSLTANPN--VVSTCVYKGKRedyECRNHIKVIQPIG 83  black-legged tick
Feature 1                                                  ##   #                                
Q24323       141 q-gDRLYVCGTNAHNPKDYVIyanlthlpr--seyvigvglGIAKCPYDPLDNSTAIYVEn--------GNPGGLPGLYS 209 fruit fly
XP_003136020 114 g-hQTLLVCSSNAMKPQLRELdalslqe-------rsspenVIGVCSAHVDLNTTAVLVEw--------GNPEDIPAIYS 177 Loa loa
Q95XP4       109 n-lDSIYVCSSVGMRPEIRVLdslslrd-------qqeprtEIGICVVDPTFNFTAVVVDs--------GNPEDATSVYS 172 nematode
NP_001033952 194 fngQKLYVCGTNAHNPKDYVInanlthlpr--sqyvpgiglGIGKCPYDPADNSTAVYVEn--------GNPFGLPALYA 263 fruit fly
EFX80330     178 d-gSRLYVCGTNAHNPKDWVInanlthlgr--neyvpgvgmGIAKCPFDPSDNSTAVWVEr--------GNPGDLPALYS 246 common water flea
EFV54168     140 d--GTLYLCSTNALNPTISILdviksttl----hvhetgssGAAICPSDPDDFGAAVWIGafeyvehehGNPGKIPSIYS 213 Trichinella spi...
ADY41866     149 g-rQTLLVCSSNAMKPQLRELdavtlre-------rsspenVIGVCSPDPNLNTTATLVEw--------GNPDDIPAIYS 212 pig roundworm
XP_392426    143 d-gNRLYMCGTNAHSPKDWVIysnlthlpr--hefvpgvgmGIAKCPYDPADNSTAVWVEk--------GNPGDLPALYS 211 honey bee
XP_002402513  84 d-gSKLYVCGTNAQNPRDLEIfssnltevprdqltlrdigrGIGKCPFDPDDNSTAVWVEr--------GNPGDLPGLYS 154 black-legged tick
Feature 1           # ##      #                 #  ## #    #                      #              
Q24323       210 GTNAEFTkaDTVIFRTDLYNTSAKrleykfKRTLKYDSKWLDKPNFVGSFDIG-EYVYFFFRETAVEYiNCGKAVYSRIA 288 fruit fly
XP_003136020 178 GIRTGLIldNNLIYRPPLVKNNKEvy--ssMRTIYTDSKWLYEPDFVASFNID-KYVYFFFREIAIEReNCEHIVFSRVA 254 Loa loa
Q95XP4       173 GIRTGMGgeNHLIYRPPLTKNGKQlh--asIRTIYSDNKWLNEPQFVGSFDVG-QHVFFFFREIAHDNsFGERIVHSRVA 249 nematode
NP_001033952 264 GTNAEFTkaDSVIFRSDLYNLTNGrkeanfKRTVKYDSKLLDKPNFVGSFEIG-EFVYFFFREHAVEYiNCGKAVYSRVA 342 fruit fly
EFX80330     247 GTNAEFTkaDAVIFRTDLYNYTTGrreftfKRTLKYDSKWLDKPNFVGSYDIG-DYVYFFFRETAVEYiNCGKNVYSRVA 325 common water flea
EFV54168     214 ATATDYTgaNRVIYRPPLLNERGDmmh-pyMSTAHTDSKWLKEPNFVAAFDVGdGYVYYFFRELAVEYmSCGTVIYSRVG 292 Trichinella spi...
ADY41866     213 GIRTGLSldNHLIYRPPLVLNNKEvh--ssMRTVYTDSKWLNEPQFVSSLSIG-SYVYFFLREVAVEHeNCGRVVYSRVA 289 pig roundworm
XP_392426    212 GTNAEFTkaDTVIFRTDLYNLTTGrkafsfKRTLKYDSKWLDKPNFVGSYDIG-SHVFFFFRETAVEYiNCGKSVYSRVA 290 honey bee
XP_002402513 155 GTVAEFTkaDTVIFRSTLFNRTTHeqseffMRTLKYDSMWLDKPNFVGSFDIG-DHVFFFFRESAVEYiNCGKVIYSRVA 233 black-legged tick
Feature 1                 ##### #                                                                
Q24323       289 RVCKKDVGGKNLLAHNWATYLKARLNCSISgeFPFYFNEIQSVYQLPs--dKSRFFATFTTSTNGL-IGSAVCSFHINEI 365 fruit fly
XP_003136020 255 RICKKDVGGKNVLRQVWTTFVKARLNCSTSskFPVYFNELQSLQSVDgr-sDSLFYATFTTPDISF-GGSAVCVFSLNSI 332 Loa loa
Q95XP4       250 RVCKKDIGGRNVLRQVWTSFVKARLNCSVSanFPFYFDHIQSVKRVDkh-gETYFYATFSTSETAF-TSSAICMFQLSSI 327 nematode
NP_001033952 343 RVCKNDRGGKYMISQNWATYLKARMNCSISseFPFYFNEIQSVYKMPt--dDTKFYATFTTNTNGL-IGSAVCSYDIRDI 419 fruit fly
EFX80330     326 RVCKKDNGGKNILSQNWATFLKARLNCSIPgeFPFYFNEIRTVYKVPg--dDTRFYAVFTTCQNGL-TGSAICVFTTADV 402 common water flea
EFV54168     293 RICKSDTGGRNLLKQTWTSFFKARLNCSISgeFPFYFNEIQDVYKVSgsnqETLFYATFSTGENGF-SGSAICVYTLSEI 371 Trichinella spi...
ADY41866     290 RLCKKDVGGKNVLRQVWTSFVKARLNCSISsqFPLYFDQIQSVQRVDgr-mDTLFYATLTTADVAF-GGSAVCVFSLNAI 367 pig roundworm
XP_392426    291 RVCKRDTGGKNILSQNWSTYLKARLNCSIPgeFPFYFNEIQSIYKVPg--dDTHFYGTFTTSTNGL-MGSAICSFHIDAI 367 honey bee
XP_002402513 234 RVCKKDTGGKNILTHNWATFLKARLNCSLPgeYPFYFNEIQSVYKFPd--dDSYVYAVFTTSLHGGpHGSAVCSFRLSDI 311 black-legged tick
Feature 1                                                     #   #  #                           
Q24323       366 QAAFn-GKFKEQsssnsAWLPVLNs--rVPEPRPGTCVNdtsnlPDTVLNFIRSHPLMDKAVNhe------hnNPVYYKR 436 fruit fly
XP_003136020 333 SQLFdhGYFLEQtssddGWIITPPe--nVPEHRPGTCTAnsasvSDSSLHFARSHLLMADAVSt--------dRPLLVLR 402 Loa loa
Q95XP4       328 NHLLdtGLLMEEta--nGQFSVTAd--eIPAHRPGTCSQnshsiSDTDLHFAKTHLLVSDSISg--------gTPILPLR 395 nematode
NP_001033952 420 NAAFd-GKFKEQatsnsAWLPVLNs--kVPEPRPGTCHNdtatlPDSVLNFIRKHPLMDKAVDhe------fgNPVFFKR 490 fruit fly
EFX80330     403 HTAFl-GKFKEQassssAWLPVLSs--kVPEPRPGQCVNdtqtlPDTVLNFIRNHPLMDEAVShe------sgVPVFFKG 473 common water flea
EFV54168     372 KAVFdsSPFKGQvsplhVWQALPSt--eTPTPRPGQCVRdsktlSDTTLHFVKTHTLMDRAVShqnnkfrspeGPLFYRK 449 Trichinella spi...
ADY41866     368 NQLFdqGMFAEQittgsSWTTTPPe--sVPPHRPGTCVAnsaaiTDGELHFAKSHLLMAEAVSa--------gPPLLTLA 437 pig roundworm
XP_392426    368 QEAFr-GKFKEQatsssAWLPVLSn--kVPEPRPGQCVNdtetfPDTVLNFIRSHPLMDSAIShe------neKPVFYKR 438 honey bee
XP_002402513 312 QGAFg-GKFKEQktsssAWLPVLTsqvrTSCSFRWPCTGs----TWTAWTTSSTTPAPVSGIS----------PSRLDGA 376 black-legged tick
Feature 1                                                                                        
Q24323       437 -DLVFTKLVVDKIridi--lnqeYIVYYVGTNLGRIYKIVQYyrn--gesLSKLLDIFEVAp-nEAIQVMEISQtRKSLY 510 fruit fly
XP_003136020 403 -DELLTHIAVDTMed-------vNVIFVYSHSSQKLHKIAHWfee--adrHSKLLATYNLQn-tGTVFAMALLP-GEFVY 470 Loa loa
Q95XP4       396 -DHVFTHIVVDQLpn-------qNVIFAFDSANRRVWKISHWkeg--newKSNLIEEKSLKiaaSRINDVALLP-AEFFF 464 nematode
NP_001033952 491 -DVILTKLVVDKIridk--lnqeFLVYFVATTSGHIYKIVQFmhy--gqrHSNLVDIFEASphsEPIREMTLSHkTGSLY 565 fruit fly
EFX80330     474 -DVAFSSLVVERLkvedpvdvkhYTVYYAGTIDGKVYKVVQWfdktsqqgKSELLDIFEVTs-pEPIRMMEISPkHKSIY 551 common water flea
EFV54168     450 -DVILQKLVVDIVvge----dssYPVIYAASNNGKLFKIVSWhdah-syvQANVVAVYKLRh-eEPVHAMQILP-GQYLY 521 Trichinella spi...
ADY41866     438 -QELFTHIAVDVLps-------vNVIFVYSHNTRKIFKLSHWega--vgsESQLLASYELEa-sQSAFAIALLP-TEFLY 505 pig roundworm
XP_392426    439 -DVMLTRLVVDKLridfvgldldYTVYYAGSSDGRVHKVVQWidnn-gesQSILLDVFDVTp-gEPIQAMEISKeHKALY 515 honey bee
XP_002402513 377 sQVSSFRKKLWYIsaffl-sppeWLYLARRAGDGLVYKLVEWkdrs-gqsFSNLVDVFEVNp-gEPIRTMEVSNeVIRLC 453 black-legged tick
Feature 1                     
Q24323       511 IGTdHRIKQIDLA 523 fruit fly
XP_003136020 471 LSDeDNVAQYFLA 483 Loa loa
Q95XP4       465 VTSgAGVSQFSVA 477 nematode
NP_001033952 566 VATdHQVKQIDIA 578 fruit fly
EFX80330     552 ATSdHRIRQVNMV 564 common water flea
EFV54168     522 IAQdVEVSQIELP 534 Trichinella spiralis
ADY41866     506 VSDaKSVSQYLLS 518 pig roundworm
XP_392426    516 VASdHRIKQIDLV 528 honey bee
XP_002402513 454 LRV-VNIPNVFEI 465 black-legged tick

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