2WHW,1GWI,1JIN,1ODO,3A4G,3VRM,1GWI,1Z8Q,1JIP,1EGY,4YZR,4J6D


Conserved Protein Domain Family
CYP107-like

?
cd11029: CYP107-like 
Click on image for an interactive view with Cn3D
cytochrome P450 family 107 and similar cytochrome P450s
This group contains bacterial cytochrome P450s from families 107 (CYP107), 154 (CYP154), 197 (CYP197), and similar proteins. Among the members of this group are: Pseudonocardia autotrophica vitamin D(3) 25-hydroxylase (also known as CYP197A; EC 1.14.15.15) that catalyzes the hydroxylation of vitamin D(3) into 25-hydroxyvitamin D(3) and 1-alpha,25-dihydroxyvitamin D(3), its physiologically active forms; Saccharopolyspora erythraea CYP107A1, also called P450eryF or 6-deoxyerythronolide B hydroxylase (EC 1.14.15.35), that catalyzes the conversion of 6-deoxyerythronolide B (6-DEB) to erythronolide B (EB) by the insertion of an oxygen at the 6S position of 6-DEB; Bacillus megaterium CYP107DY1 that displays C6-hydroxylation activity towards mevastatin to produce pravastatin; Streptomyces coelicolor CYP154C1 that shows activity towards 12- and 14-membered ring macrolactones in vitro and may be involved in catalyzing the site-specific oxidation of the precursors to macrolide antibiotics, which introduces regiochemical diversity into the macrolide ring system; and Nocardia farcinica CYP154C5 that acts on steroids with regioselectivity and stereoselectivity, converting various pregnans and androstans to yield 16 alpha-hydroxylated steroid products. Bacillus subtilis CYP107H1 is not included in this group. The CYP107-like group belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.
Statistics
?
PSSM-Id: 410655
Aligned: 87 rows
Threshold Bit Score: 376.871
Created: 3-Apr-2007
Updated: 25-Oct-2021
Structure
?
Program:
Drawing:
Aligned Rows:
 
heme bindingchemical
Conserved site includes 29 residues -Click on image for an interactive view with Cn3D
Feature 1:heme binding site [chemical binding site]
Evidence:
  • Structure:2WHW: Streptomyces venezuelae P450 mono-oxygenase PikC binds heme; contacts at 4A
  • Structure:4J6D: Nocardia farcinica CYP154C5 binds heme; contacts at 4A

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                                             #      #                                
2WHW_A     48 PYPTYARLRa-eGPAHRVRtpe--gnEVWLVVgYDRARAVLADPRFSKDWRnsttp----------------lteaeAAL 108 Streptomyces venez...
AAT45270   71 PYTGYGTLRe-qAPLVRARfid--dsPIWLVTrFDVVREVMRDQRFVNNPTlvpgigadkdprarlielfgipedltPYL 147 Streptomyces rimos...
ABW00326   25 PHAAYEHLRe-qAPACPIRsie--gsLMWIVArHDGVRSVLGDARFANNPAsvpggkapqlqan-amrrlgldeeliPYL 100 Salinispora arenic...
EDY52881   27 PFTAYAHIR---ARKRMVRgsvpgvdPMWVATrYDDIRAVMSDPRFTIDATgvpgapvahrteq-twqargmhrgyeKYL 102 Streptomyces clavu...
JC4003     15 PFGAYAEIRa-qAPLVRASypw--gaVQWLATrYSDVKAVLTDPRLVNNPAnvpemhlphpyeq-algdggipdeyvRYL 90  Streptomyces sp.
CAN89650   22 DREAGERWTgapRPVCPGRfsd--gaDVYVVTrYEAVRSLFADRRVSNHPPegvhldsmr--------rrgvpeellKYF 91  Streptomyces colli...
ACU37768   18 PVGGYDHLLa-eRPVCWARlpg--gqEGWLVTgNAEVRAVLTHPAVRNDPTglpgrgartqee--vflalgtppehlPYL 92  Actinosynnema miru...
AAY28212   28 PYPLYERMRe-tGPVHRVRfps--gvLAWLVTgYDAAHSALGDERLGKNHDrgndrwrar--------asimpepqhSQL 96  Streptomyces hygro...
BAG17724    5 PYPGYAWLRe-hDPVCPVGgph-vpgRMWLVTrYDDVRACLADRRLGSRAPvd-----------------------pDPH 59  Streptomyces grise...
ACZ90125  184 DPGALRQWRe-lGPVHRVNtad--vaTSWVLTgHEATTTALAGPGLAGEVEitagfrlq-----------sadpalaHRG 249 Streptosporangium ...
Feature 1        ##      #   #      #                                                         
2WHW_A    109 NHNMLESDPPRHTRLRKLVAREFTMrRVELLRPRVQEIVDGLVDAMLaap-dgRADLMESLAWPLPITVISELLGVPepD 187 Streptomyces venez...
AAT45270  148 ADTILTSDPPDHTRLRRLVSRAFTArRIQDLRPRVEQITDALLERLPdhaedgVVDLVEHFAYPLPITVICELVGIDeeD 227 Streptomyces rimos...
ABW00326  101 ADTLLDSDGKDHNRLRRLVTPAFSArKVKALGPRIERLTDDLIDALPqhagggVTDLLEHFAYPLPINVIGELVGVPaaD 180 Salinispora arenic...
EDY52881  103 RAGIFDADGADHRRLRGLVGAAFSPrRVTGLRPRIETVATGLLDRLPdhaedgVVDLIEHYARPLPITVICELIAVPeaD 182 Streptomyces clavu...
JC4003     91 AGSILSQDGPGHLRLRRLSSRAFTVrRVNALRPRVTELAHRLLASLPdraqdgVIDVLEDFSYPLSIDVICEIVGIPeeA 170 Streptomyces sp.
CAN89650   92 DSTIMTMVPEDHRRVRSLIDRAFSVrRVKSLRPRIERLADQLLDQMDpe---gETDLVAGYAHPISTTVICELLGVDdeY 168 Streptomyces colli...
ACU37768   93 RASLLSLDGAEHARLRRGIGHAFSAsRVQALRPRVQEIVDGLLDGLGp----aTADLLEEYAYPLAMAVVCELVGVPeaD 168 Actinosynnema miru...
AAY28212   97 QVHLLHQDPPTHTRMRRFVTDAFTPrRIEQLRPRFQKLADTLVDALPet---gPADLVTGFAARFPFQVLAEVIGLPdeL 173 Streptomyces hygro...
BAG17724   60 PPGLSHLDGPGHARLRRLVAAAFTPaAVARLRDRTARTCAHAVESFAgr---gHADLVAEYTREIPVAVMHDLLGVPetE 136 Streptomyces grise...
ACZ90125  250 ELDLITIEGREHARLRRLIERHLTPeRVEALRPRIQRETDALLDAVPsr---eVIDLLQRFAYPLPVAVLCELFGVPerD 326 Streptosporangium ...
Feature 1                                                                                 ##  
2WHW_A    188 RAAFRVWTDAFVFPdd-----paQAQTAMAEMSGYLSRLIDSKRgqdGEDLLSALVRTsdedgsRLTSEELLGMAHILLV 262 Streptomyces venez...
AAT45270  228 RTLWRRFGADLASLnp------kRIGATMPEMIAHIHEVIDERRaalRDDLLSGLIRAqdddggRLSDVEMVTLVLTLVL 301 Streptomyces rimos...
ABW00326  181 LPAWLRWTHDLSFNq-------qALGQTLRPLVDYTYDLVRHRYdepGEDLISELIQArdadgdRLSERELVTMVLSLVI 253 Salinispora arenic...
EDY52881  183 RDRWRARSATLVAGvc-----gdELGDALAGMVDDAITLVDHHTahpGDDLISDLLDPrh--rdRLSPEELVALIVNLVV 255 Streptomyces clavu...
JC4003    171 REQWHTWGSAFYTMdp------aVIGPAVRGMADHLHLLIEQRRatpTGDLLTGLVQAedeqgePLTDEEIATLVLTFVT 244 Streptomyces sp.
CAN89650  169 RDQWLKWSEAFTTFvrp---dpeILPPALHGMVDTVIRLIGARRaqpGDDLISDLVQIsde-teKLDEVELVALVLVLVQ 244 Streptomyces colli...
ACU37768  169 WAHWYRWGKALVDGdp------aRITPTLGEMFAHCHELVDRRRaepRADLLSEVVARd-----DLTDVDVVALVVFLVL 237 Actinosynnema miru...
AAY28212  174 AARFDRDWGKVVQPvgpadpgrpLYEARLHGLQSYIAEVVAHKRehwADDLLSRLVVAhd--rrELSQEELDSMIFQLLV 251 Streptomyces hygro...
BAG17724  137 RAPAADVLDMWYRAkfr----qpRDEASLAELLDYVGELVAYKRthpGDDLTTRLIDSd-----ALTGEELEVMVMTLIG 207 Streptomyces grise...
ACZ90125  327 RGYIHEWILERLVS---------PPPKAHGDIDDYLRVLIADRRarpSDDLLGWVVEAeg---dGLSEEDLVSAARFLMV 394 Streptosporangium ...
Feature 1     #   ##  #                                #    ##  ## #                      #   
2WHW_A    263 AGHETTVNLIANGMYALLSHpdQLAALradmtlLDGAVEEMLRYEGPVeSATYRFPVEPVDLDGTVIPAGDTVLVVLADA 342 Streptomyces venez...
AAT45270  302 AGHETTAHLISNGTLALLTHpdQRRLIdedpalLPRAVHELMRWCGPIqATQLRYAMEDTEVAGVQVRQGEALMFSLVAA 381 Streptomyces rimos...
ABW00326  254 AGHDTTANFIANSIWALLTHpeQLALLradpglMPQAVQELLRWCGPVlVSRMRYATEDVDLGWGTFQTGDAVTVALSGG 333 Salinispora arenic...
EDY52881  256 AGHITTVNLIANGTEALLTHpgQLALLrddptlMPHAVDELMRYCGPVvRALPRYALCDTTLGATPVKAGEAVLPIVSAA 335 Streptomyces clavu...
JC4003    245 AGNETTAHLIGNGVAALLTHsdQLALLrsdrrlLSQAVDELMRWCTPVqVTQPRYATEDLDVGGVTVRKGEQVVAVIGAA 324 Streptomyces sp.
CAN89650  245 AGLDTVRHSISLSFFNLLVHpdQLELVkshpenTVQAVRELMRYSGPIkMALPRFAAEPIEIDGVTIPKDGQIQLVVGAA 324 Streptomyces colli...
ACU37768  238 AGHETMAHLLSNAALALMRDpaQRELLraepglWPAAVRELVRTDGPVqLARLRYAATDLEVGGVRISAGDAVQAVLGAA 317 Actinosynnema miru...
AAY28212  252 AGQEPVTNQITTALIALFRHpaELARLrdnpelMPRAVDELLRYDSAFeLTTWRFFDQDSDLHGTEVPAGDSVIISLCAA 331 Streptomyces hygro...
BAG17724  208 AGHITTIQFLGTTVLHLLDHpgHRAALlrgdldWPRAVNELLRLDSPShVAEYRYAGEDMTLADARVGEGDVVLLSLAAA 287 Streptomyces grise...
ACZ90125  395 NGHRAPTTVLASGVAALLRRe-QWKRLaddptlTVTAVEELLRLVTPFpVGIPRHVAAPIDVKGTPIPEGSLLTASLVAA 473 Streptosporangium ...
Feature 1                                 ###  ## ###   #                                     
2WHW_A    343 HrtperfpdPHRFDIRRDta-----ghLAFGHGIHFCIGAPLARLEARIAVRALLERCPdLALDvspGELVWYPNPm--- 414 Streptomyces venez...
AAT45270  382 NhdprhytgPERLDLTRQpagr-aedhVGFGHGMHYCLGASLARQEAEVAYGKLLTRYPdLELAltpEQLEDQERLrqpg 460 Streptomyces rimos...
ABW00326  334 NhdprrftdPGRLDITRQhdtr-gevhLSFGAGPHYCLGAALARHEAEIALSRMLARHPdLALAvpaEQLQWHAVSg--- 409 Salinispora arenic...
EDY52881  336 NrdpaaftdPDRLDLGRTrrlr--ehhLGFGHGAHRCLGAHLAHEEAVIALTTLLDRAPeLRLAvdpRRLEHGTNPv--- 410 Streptomyces clavu...
JC4003    325 GhdpdrfpdPERFDITRNhrap-heahVGFGFGPHYCLGAALAHQETAIALDTLFDRFPsLALAvppSALERQPFPg--- 400 Streptomyces sp.
CAN89650  325 NndperftdPRVLDVTRAdn-----pqLSFAAGDHFCPGASLATAETEIALNKLFARYPdVRLAa--DPDEVGPRF---- 393 Streptomyces colli...
ACU37768  318 NrdpaqfacPRHADVRGQaergareggVGFGWGPHFCLGVALAKVEAEIALRSLFDRFPsVAPV---GEPAWVPLPr--- 391 Actinosynnema miru...
AAY28212  332 NrdprrfpdPDTLDLDRSpn-----phLAFGHGIHFCPGAALARAELQIALGTLLTRLLgAHLAiddGDIEWIPAVl--- 403 Streptomyces hygro...
BAG17724  288 NrdpdrfpdPGTLDLTRDar-----phLAFGHGAHTCLGSHLVRLETEIAVTTLFGRLPdLALDipgGEVAWGYAPt--- 359 Streptomyces grise...
ACZ90125  474 NrdpsffadPDLLDIRRTsn-----phLAFGHGHHHCLGAELARAQLQIAIGTLARRFPdMELArdsQSLHYRQSS---- 544 Streptosporangium ...
Feature 1                
2WHW_A    415 IRGLKALPIRW 425 Streptomyces venezuelae
AAT45270  461 TWRLRRLPLKL 471 Streptomyces rimosus subsp. paromomycinus
ABW00326  410 MRKLATLPVRL 420 Salinispora arenicola CNS-205
EDY52881  411 NRHLKALPVRW 421 Streptomyces clavuligerus ATCC 27064
JC4003    401 AWRLKSLPVRL 411 Streptomyces sp.
CAN89650  394 LKAVTRLPVQL 404 Streptomyces collinus Tu 365
ACU37768  392 GRHRVALEVAL 402 Actinosynnema mirum DSM 43827
AAY28212  404 GRGTNHLPVGY 414 Streptomyces hygroscopicus
BAG17724  360 FRGPLALPVTF 370 Streptomyces griseus subsp. griseus NBRC 13350
ACZ90125  545 VRYLLGLPIVL 555 Streptosporangium roseum DSM 43021

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap