2R7E


Conserved Protein Domain Family
CuRO_2_FVIII_like

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cd11015: CuRO_2_FVIII_like 
Click on image for an interactive view with Cn3D
The second cupredoxin domain of coagulation factor VIII and similar proteins
Factor VIII functions in the factor X-activating complex of the intrinsic coagulation pathway. It facilitates blood clotting by acting as a cofactor for factor IXa. In the presence of Ca2+ and phospholipids, Factor VIII and IXa form a complex that converts factor X to the activated form Xa. A variety of mutations in the Factor VIII gene can cause hemophilia A, which typically requires replacement therapy with purified protein. Factor VIII is synthesized as a single polypeptide with six cupredoxin domains and a domain structure of 1-2-3-4-B-5-6-C1-C2, where 1-6 are cupredoxin domains, B is a domain with no known structural homologs and is dispensible for coagulant activity, and C are domains distantly related to discoidin protein-fold family members. Factor VIII is initially processed through proteolysis to generate a heterodimer consisting of a heavy chain (1-2-3-4) and a light chain (5-6-C1-C2), which circulates in a tight complex with von Willebrand factor (VWF). Further processing of the heavy chain produces activated factor VIIIa, a heterotrimer composed of polypeptides (1-2), (3-4), and the light chain. This model represents the cupredoxin domain 2 of unprocessed Factor VIII or the heavy chain of circulating Factor VIII, and similar proteins.
Statistics
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PSSM-Id: 259901
Aligned: 3 rows
Threshold Bit Score: 257.912
Created: 4-Jun-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 4 residues -Click on image for an interactive view with Cn3D
Feature 1: Type 1 (T1) Cu binding site [ion binding site], 4 residue positions
Conserved feature residue pattern:H C H MClick to see conserved feature residue pattern help
Evidence:
  • Structure:2R7E; Human Coagulation Factor Viii heavy chain binds to copper.
  • Comment:Type 1 (T1) copper sites are characterized by their conserved H...C...H...M copper ligands.
  • Comment:Some members bind copper at the T1 site with three amino acid residues (HCH), instead of four (HCHM).

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                     #   
2R7E_A        193 LHKFILLFAVFDEGKSWHSEtknslmqdrdaasarawpkMHTVNGYVNRSLPGLIGCH-RKSVYWHVIGMGTTPEVHSIF 271  human
AAO33374      216 NQAFVLLFVVFDESKSWYGEvgerksrdk-fkrsdsrkeFHTINGYINATLPGLKICQgRNPVIWHLIGMGTAPAIHLIQ 294  torafugu
XP_002187514  197 QKEFVLLFAVFDEGKSWYSEqsspagaq---ppahnrteLHTINGYINGSLPGLTLCL-KKQVHWHVIGLGSGPEVHSIF 272  zebra finch
Feature 1                                                #    #    #      
2R7E_A        272 LEGHTFLVRNHRQASLEISPITFLTAQTLLMdLGQFLLFCHISSHQHDGMEAYVKV 327  human
AAO33374      295 FQHHTLEVLTHRKVTVEVTPMTFVTAEMKPAtVGSFLISCQIHAPRHDGMSAMFLV 350  torafugu
XP_002187514  273 FEGHTFLVRSHRLGSLEISPATYLTAQTTPGtAGWFRMFCQILSHQQVGMEAFVKV 328  zebra finch

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