Conserved Protein Domain Family
CE4_Sll1306_like

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cd10978: CE4_Sll1306_like 
Putative catalytic domain of Synechocystis sp. Sll1306 protein and other bacterial homologs
The family contains Synechocystis sp. Sll1306 protein and uncharacterized bacterial polysaccharide deacetylases. Although their biological function remains unknown, they show very high sequence homology to the catalytic domain of bacterial PuuE (purine utilization E) allantoinases. PuuE allantoinase specifically catalyzes the hydrolysis of (S)-allantoin into allantoic acid. It functions as a homotetramer. Its monomer is composed of a 7-stranded barrel with detectable sequence similarity to the 6-stranded barrel NodB homology domain of polysaccharide deacetylase-like proteins in the CE4 superfamily, which removes N-linked or O-linked acetyl groups from cell wall polysaccharides. PuuE allantoinase appears to be metal-independent and acts on a small substrate molecule, which is distinct from the common feature of polysaccharide deacetylases that are normally metal ion dependent and recognize multimeric substrates.
Statistics
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PSSM-Id: 200600
Aligned: 6 rows
Threshold Bit Score: 505.45
Created: 5-Jul-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative activeputative
Feature 1:putative active site [active site]
Evidence:
  • Comment:Based on similarity to the sequence of Pseudomonas fluorescens PuuE allantoinase

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                      # #                                                               
YP_004355086  56 FWPGDTRLVISISMQFEAGGQPpkgtdsPFPPVDFpdsvpSDPATNTWFAYGYREGIPRMLDLWDRHDVKVTSHMIGeAA 135 Pseudomonas bra...
NP_902479     50 FWPGDARLVISISMQFEAGAQPergasgPFPPLDPk---yPDLPMQTWYDYGVKEGIPRMLDLWDRVGVKVTSHMVGqAV 126 Chromobacterium...
P73597        41 FWPDNIRLPISLSLMFETGSQPakgaptPFGNFTPpp-dyYDMPTITWYRYGYTEGVPRILDLLDKYKIKITSHMSGrTV 119 Synechocystis s...
YP_003123753  38 SWIDGSRLVVSVSMQFEAGGQPvna-esPFPQNMVkg--yKDLPSETWYQYGYKEGIPRMLDTWDKLGIKVTSHMVGsAV 114 Chitinophaga pi...
NP_719680     55 FWPNGEQLVISISMQFEAGAQDkna-egPFPPMEQg---yPDTITPSWYDYGMNEGIPRLLRLWRKHHIQVTSHMVGrAA 130 Shewanella onei...
ADW68503       7 FWPNGARLAVSFSLMFEGGGQPisg-apGFFEEPMek-glPDLATNGVFQYGIYEGIPRILDLMDKHQVKLSSFMIGqAV 84  Acidobacterium ...
Feature 1                           #   #                                  ###                   
YP_004355086 136 RRQPSLAREIVARGHEAAGHGPRWSSQFaMSREEERTFLRQAAQMVQEvTGQPVTGYNCNWLRrGPNTLALLQELGYLYH 215 Pseudomonas bra...
NP_902479    127 DRHPQLAREIVERGHEAAGHGQTWEPQFsMTPAQERAGYLASIASIERaTGTRPIGFNAFWLRgTPNTLGILQELGFVYH 206 Chromobacterium...
P73597       120 EMYPDRAKEIVQRGHEAAAHGWDWDNEFnMTAPQERDFIQRNVDIILKvTGQRAVGYNAPGLRgSVNILTVLNELGFVYH 199 Synechocystis s...
YP_003123753 115 LKNPSLAKEIVQRGHEAAAHGRDWATQYtMSYEEERKFIQDGVDAVKQvTGMTPKGYNANWLRrGEHTLQILQELGFTYH 194 Chitinophaga pi...
NP_719680    131 ELHPQLAKQVADEGHEIAGHGQTWTPQFsMSPAQERASYIESINTLEKiTGQRPIGFNAFWMRhSTQTLNILQDLGFIYH 210 Shewanella onei...
ADW68503      85 DKAPDLAREIVRRGHEAGAHGRSWQNSYlLDRESERRFIVDGMESIQRaTGQTPVGWNAYFVRnSPHTLDILQSLGFVYH 164 Acidobacterium ...
Feature 1                                                                                #       
YP_004355086 216 IDDVSRDEPFIESV-NGKDFAVVPYTLRnNDIVLIEGr-hYSPQAFLEQVKLDFDQLYEEAGtRRRMMSISAHDRISGtP 293 Pseudomonas bra...
NP_902479    207 IDDISRDEPFTVPV-NGKPFMVVPYTLRnNDIVRYDAp-aLTVDAYLADLKAEFDLLYQEAGrRRRMMSISTHDRISGtP 284 Chromobacterium...
P73597       200 IDDVSRDEPFIVNLnNGKSIMVVPYAVYlNDIRAYEAr-fFSSGQYLTELKNSFDRLYEEAAyRRRMMAVTMHDRLQR-P 277 Synechocystis s...
YP_003123753 195 IDDLSRDEPFIIQV-NNKDFVVVPYTLRnNDIVLVSGq-wYSSDQFLQQVKMEFDQLYEESAnRRRMMSVSFHDRIGGtP 272 Chitinophaga pi...
NP_719680    211 IDDLSRDEPSITPV-QGKPFAVVPYTLRnNDIGRFGGntaMTAADFLQELKDEFDMLYQEGVsQRRMMSISVHDRIGGtP 289 Shewanella onei...
ADW68503     165 IDEPSADQPFIIKL-KGGDFVTVPYTLHlNDIASFTFv-gWNPVAYEQALRDEFDQLYEEGAhRRRMMVIGLHDRISGhA 242 Acidobacterium ...
Feature 1                                           
YP_004355086 294 QMVRVWDEFLRYAKSHpGVTFMRKDDIARYTLASA 328 Pseudomonas brassicacearum subsp. brassicacearum NFM421
NP_902479    285 ARVRALETFIRYAQSHpGVRFMRKDEIARFALTAP 319 Chromobacterium violaceum ATCC 12472
P73597       278 EHVYVFEDFLKYVMAKpGVAFMKKIDIANFALNDP 312 Synechocystis sp. PCC 6803
YP_003123753 273 QMVKAATELFTYMQQHkGVTFRRKDDIARMALSDK 307 Chitinophaga pinensis DSM 2588
NP_719680    290 GLANALDKFIQYAKEHsKVGFMRKDAIAKWALAQK 324 Shewanella oneidensis MR-1
ADW68503     243 NRVRVLDRFLTYARSKtDVWFARKDEIAALALEHR 277 Acidobacterium sp. MP5ACTX9

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