Conserved Protein Domain Family
CE4_Mlr8448_like_5s

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cd10968: CE4_Mlr8448_like_5s 
Putative catalytic NodB homology domain of Mesorhizobium loti Mlr8448 protein and its bacterial homologs
This family contains Mesorhizobium loti Mlr8448 protein and its bacterial homologs. Although their biochemical properties are yet to be determined, members in this subfamily contain a conserved domain with a 5-stranded beta/alpha barrel, which is similar to the catalytic NodB homology domain of rhizobial NodB-like proteins, belonging to the larger carbohydrate esterase 4 (CE4) superfamily.
Statistics
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PSSM-Id: 213025
Aligned: 23 rows
Threshold Bit Score: 200.553
Created: 16-Aug-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative activeputative metal
Feature 1:putative active site [active site]
Evidence:
  • Comment:based on similarity to other CE4 superfamily members

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1               ##                                                                       
AEG03449     101 PFACFTLDDGYRSNLDHALPVFERHGVPFTVFVTAGYLDRSHTLWWETIAdllsvcgrfrfdfgageeavasdnlaqkqa 180 Sinorhizobium m...
ZP_05083143   68 RFAVLTFDDGYKDNRDVAYPILKELGVPFTIFISSEYSNHNSELWWIILEqliaentsvslrygerqfnydcsslelket 147 Pseudovibrio sp...
ZP_07660573   99 RYAVLTFDDGYKDNLEQAYPVLKELGAPFTVFVTSGLIDRTSELWWLAIErlvaanselvitegsekgpiscatpeekdr 178 Roseibium sp. T...
ZP_03129049   87 RFVCFTFDDGYRDNATLALPIFREFGAPFTVNITNGFIAGNASVWWYWIEeilnagkalqfswkgtphhftaattgerdr 166 Chthoniobacter ...
YP_004305638  89 PFVVLTFDDGYRSNLELALPVMERYEAPAIIFVPTGMVTRTVNAWWLGLRdmivsneaidveplgmrldcadldakiaal 168 Polymorphum gil...
NP_772945    120 RYAVLTFDDGYRDNASVGLPILERHNAPFMMYVPTGAPTRSMQSWWLGLRrvflsrdrvsidalgrqfqcsdlrsktsal 199 Bradyrhizobium ...
ADW12139      87 RNMVVTLDDGYRDNFEHAWPIFRRHGVPFAVYVANSFPGGTADFWWYTLEelllahrrieleqrdervtldvavpraafm 166 Geobacter sp. M18
ABP37086      71 KLYVLTADDGYKNNFHFSMDVLREYDVPICIYVGTSFPEKTIKLWWYALEdalldtfnggvglesrgdferlnkifnrlk 150 Prosthecochlori...
YP_001771738  94 RFIVFTFDDGYVDNLQYALPVFEKHRAPMTIYVTTSMITGELYCWWLALErliletsrvdiapmgrrfvcatmgdklray 173 Methylobacteriu...
ZP_07805980   86 YFICLTIDDGYKDNLTFGYPIFAKYNIPFCIYICTSFPESSHNMWWFGLEdyllahdnityknaeydistkalkeamflt 165 Helicobacter ci...
Feature 1                                                                                   #   #
AEG03449     181 afdri-aayvhgsdeahalatlnkaahehgidplaiterlTLDEEGLRSLIRS---------------PLASLGGHTISH 244 Sinorhizobium m...
ZP_05083143  148 afeasrcmlisevpetaqrevvreaaeryghdwralcqelILSFEELKELAED---------------PLVSLGAHTDTH 212 Pseudovibrio sp...
ZP_07660573  179 cyehlmdvlgrevgeeeqraivralaarygldltaladeyMMTWDDLRQLAAD---------------PLVTIGAHTHDH 243 Roseibium sp. T...
ZP_03129049  167 alee--iarlvrglgaerdallrvigeaagldpcaltrklCLTWEELRALAAD---------------PLVTIGAHTAGH 229 Chthoniobacter ...
YP_004305638 169 rrl-----tawvwddfrrvdllddafaahgvrmpdlverlAMSEREMIQADRH---------------PLIEIGAHTTTH 228 Polymorphum gil...
NP_772945    200 aev-----trwvhqdyrrgamlssvfeesgislaelndeyFLDERELCTLARH---------------PLASIGGHSTSH 259 Bradyrhizobium ...
ADW12139     167 af------kgiyqslpgsgqaefmarlmeryplpgrherlAMTWDEIRELATD---------------ELCSIGCHTLSH 225 Geobacter sp. M18
ABP37086     151 kk-------yqngydskpeeffhkyfpgfnlewkkyhensCLTWSEIKRMNQS---------------DLVTIGSHGISH 208 Prosthecochlori...
YP_001771738 174 rei----stwvsdditgrapllqplflvsgvstrqivenvGLSVEQLKYLGRN---------------DLVTIGGHTDRH 234 Methylobacteriu...
ZP_07805980  166 m--------radiiaqindycqqtlenfgisynprdydnlTLSWEDIAFLHAQklqntsknmlgggqrQLCTIGCHTHSH 237 Helicobacter ci...
Feature 1                                            ###                                         
AEG03449     245 RALARlg-ddEARREISASAERVRtiTGRRPSSFAYPYGDRlavSPRDHLLAAELGFAVAVTTQPGMLsea--anPHALP 321 Sinorhizobium m...
ZP_05083143  213 PMLARlsteaEIRQHIQAGQQEMVarLGKRPTMLAYPYGFAeavDRRCEAVAEELGFAAAVTTQPGTLsaknlerPYHLP 292 Pseudovibrio sp...
ZP_07660573  244 YALARls-aeAAEGDIDHGAHRIEqeLGLRPKHFAYPYGKPysvCDRDAEYLEHAGFASALTTFPGVLnstsaktPMKLP 322 Roseibium sp. T...
ZP_03129049  230 HSLNRlt-deELVVEVDGARRALAaqLGREVRHFAYPFGGAkavSEREFALVRSSGFATMLTTRPGNLtrehsaqMDRLP 308 Chthoniobacter ...
YP_004305638 229 RALGLls-adEVATDIGDNKRFLEerLQREVPYFAYPYGPPsitGRREADIVKALGFRAAMTTEPGCLfpehgedPYLIP 307 Polymorphum gil...
NP_772945    260 QALSTld-sdSARAELADNRSYLEnmLQLPVRHVAYPYGVC---GPREEDLARQAGFQTATTTRQGRLydd-klnRFALP 334 Bradyrhizobium ...
ADW12139     226 RSLAPls-rqEAYDELTNSRAEIEheIGRPVRHLAYPYGKAvdaGKREEDLAGEIGFQTAVTTRVGNLhashrdhLLMLP 304 Geobacter sp. M18
ABP37086     209 SRLSNls-ddKLFYEMRYSKKIIEkkIGADVEHFSYPYGGRidaYDREYDAAKKCGYKTAVTTCYGVVnrknkyqMMSLP 287 Prosthecochlori...
YP_001771738 235 AELSRlg-esEARAEIVANKRYLEdtLQNEVSHFAFPFGGRtacGEREARLVREAGYRTAVTTEHGCVfdrhlgrLHLLP 313 Methylobacteriu...
ZP_07805980  238 PIFNNls-ndKIAQDIAKAQKLFLqnLHFTPTHFAYPFGSRveiSPHHFSLIRNLGFKTATTTRHGTIypqhtksLHALP 316 Helicobacter ci...
Feature 1               
AEG03449     322 RISLNGH 328 Sinorhizobium meliloti BL225C
ZP_05083143  293 RVSLNGL 299 Pseudovibrio sp. JE062
ZP_07660573  323 RVSLNGR 329 Roseibium sp. TrichSKD4
ZP_03129049  309 RLTISGN 315 Chthoniobacter flavus Ellin428
YP_004305638 308 RQDAEYT 314 Polymorphum gilvum SL003B-26A1
NP_772945    335 RIGISSP 341 Bradyrhizobium japonicum USDA 110
ADW12139     305 RIPLYEG 311 Geobacter sp. M18
ABP37086     288 RISYLEG 294 Prosthecochloris vibrioformis DSM 265
YP_001771738 314 RIGSSRH 320 Methylobacterium sp. 4-46
ZP_07805980  317 RVFFSEN 323 Helicobacter cinaedi CCUG 18818

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