Conserved Protein Domain Family
CE4_Mll8295_like

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cd10946: CE4_Mll8295_like 
Putative catalytic NodB homology domain of uncharacterized Mll8295 protein encoded from Rhizobium loti and its bacterial homologs
This family is represented by a putative polysaccharide deacetylase Mll8295 encoded from Rhizobium loti. Although its biological function still remains unknown, Mll8295 shows high sequence homology to the catalytic domain of Streptococcus pneumoniae polysaccharide deacetylase PgdA (SpPgdA), which is an extracellular metal-dependent polysaccharide deacetylase with de-N-acetylase activity toward a hexamer of chitooligosaccharide N-acetylglucosamine, but not shorter chitooligosaccharides or a synthetic peptidoglycan tetrasaccharide. Both Mll8295 and SpPgdA belong to the carbohydrate esterase 4 (CE4) superfamily. This family also includes many uncharacterized bacterial polysaccharide deacetylases.
Statistics
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PSSM-Id: 200570
Aligned: 7 rows
Threshold Bit Score: 271.199
Created: 7-Jul-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:putative active site [active site]
Evidence:
  • Comment:Based on similarity to the sequence of Streptococcus mutans CE4 esterase (2W3Z).

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1               ##                                                          #   #        
Q983K0        67 RIIYLTFDDGPlNGTSNILDVLEAEQVPATLFMVGmhaea-----gasnKALVRRAKAm-pLVTIGNHSYTHAYnhy--- 137 Mesorhizobium loti
YP_004238802  74 KFVYLTFDDGPqEGSEKINKIVSEENIKATVFLVGfnaf------tpklKSYVKDYKDn-kNIELANHTYTHARnky--- 143 Weeksella viros...
ZP_07088253   67 RVIYLTFDDGPnQGTENLLKILDKRNVCATAFLVGkhayg-----skkqKDDLLLLKQn-pLIELANHSFTHAHnky--- 137 Chryseobacteriu...
YP_004043045  35 QYVYLTFDDGPlDGSQNIDSIILAEKIKISVFLIGsevd------gdrdMETYFKYYEenpYIDEYNHSFTHGNdqy--- 105 Paludibacter pr...
YP_004168086 113 KELYLTFDDGPlRGTGNVLKILKEEGVPATMFCVGrha--------qqhPGLLQEELSm-pNLLIANHTYSHANghy--- 180 Nitratifractor ...
YP_001365615  25 KTIYLTFDDGPiDATLGLLDALKDANIKATFFINAfhmygegdenealaAVALQRLLDn--GHILANHSYDHMLhnctdg 102 Shewanella balt...
EGS58759      28 GTIYLTFDDGPvNASVEVIKLLNQGGVKATFYFNAwhldgigdenedhaLEALKLALDs--GHIVGNHSYDHMIhncvee 105 Vibrio cholerae...
Feature 1                                                                  ###                   
Q983K0       138 ---------------------------rhFYGDTEGVVADMLMANVVLGLkpaVHARLPGRDVFRLPSMs---------- 180 Mesorhizobium loti
YP_004238802 144 ---------------------------sqFYSNADNVLKDIERNNDSILFp-nRIVRFPGRNIWRVGKRkhn-------- 187 Weeksella viros...
ZP_07088253  138 ---------------------------tdFYKNADAVVHDFDIAKDSLRLt-dKIARTPGRNIWRLNNInv--------- 180 Chryseobacteriu...
YP_004043045 106 ---------------------------tlFYSNPHKATEDFLKNQEFLKIq-yKIIRMPACNTWRFNNRk---------- 147 Paludibacter pr...
YP_004168086 181 ---------------------------rrFYSNTFGLLSDIEHAQLILGGr--KYLRLAGRNVWRTPEIk---------- 221 Nitratifractor ...
YP_001365615 103 vqsgavycnqv-glwpvksyqdaatdftyFVTNTAKVVELIPNAASYPNNkmtKLARLPYTNGWRVSSKlkgdglcatsd 181 Shewanella balt...
EGS58759     106 fgptsgadcnatgnhqihsyqdpvrdaasFEQNLITLEKYLPTIRSYPNYkgyELARLPYTNGWRVTKHfqadglcatsd 185 Vibrio cholerae...
Feature 1                                                #                                       
Q983K0       181 --------------kDDNSLGPAQagred-pdyeFVAASGFylYGWDHEWVhkds--gepvQSVDHLVSEIDHLfgygh- 242 Mesorhizobium loti
YP_004238802 188 -------------dfDKASAQVAD----------YIASKQYaiYGWDYEWErpkk--gnsiDSPQSIYKGIMHRlekny- 241 Weeksella viros...
ZP_07088253  181 --------------tDIKSSTAAAd---------GLKKAGYkvIGWDLEWRpsqk--mtlkGSHEVMIKKVDSIflndl- 234 Chryseobacteriu...
YP_004043045 148 --------------qDDCEINAVAta-------dSLAARGFkvYGWDVEWQhheed-gtpvQSVDEMYKQIMDLlntnk- 204 Paludibacter pr...
YP_004168086 222 ---------------RDDLAIVALrgrvevpeydSISKDGFyiYGWDTEWHynhat-gkpiESPEKVAAKIDHLyrrhr- 284 Nitratifractor ...
YP_001365615 182 tvppwdpafactaetSTNSSQVAVqi------qnMLAESDYkiFGWDFDWGpedwgvafpaESMADGVELVDKInqvint 255 Shewanella balt...
EGS58759     186 n---lkpwepgyvcdPANPSNSVKasiq---vqnILANQGYqtHGWDVDWApenwgipmpaNSLTEAVPFLTYVdkalns 259 Vibrio cholerae...
Feature 1                                     # #                                         
Q983K0       243 --------------------fakpgKLILLMHDEMFQdgf------dgkTKLTDLITALKLr-HYAFGTIPNY 288 Mesorhizobium loti
YP_004238802 242 --------------------tfeknHLILLMHDNMFSsve-------nsEKLRELIRLIKGndKLVLDVISNY 287 Weeksella virosa DSM 1...
ZP_07088253  235 --------------------ektsrHLVFLTHDQYLRdad-------siNELDLFIEKLQKsnKFVFRKISQY 280 Chryseobacterium gleum...
YP_004043045 205 --------------------tftknNIVILLHDEMFQrrw-------eeTDLKQLIDRLRKdkNIVFEQMRFY 250 Paludibacter propionic...
YP_004168086 285 --------------------sakpgKVILLAHDFMFRtqa-------gaSRLRRFIRLMKQr-GWSFHTIRHY 329 Nitratifractor salsugi...
YP_001365615 256 cagttmnplnsrtqnldcsdglhdgKVVILTHDFLFEnahrgqgatinlPKIKRFVEEAQRq-GYRFDTLDNY 327 Shewanella baltica OS185
EGS58759     260 cspttiepinsktqefpcgtplhadKVIVLTHDFLFEdgkrgmgatqnlPKLAEFIRIAKEa-GYIFDTMDNY 331 Vibrio cholerae HE-09

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