Conserved Protein Domain Family
CE4_cadherin_MopE_like_N

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cd10934: CE4_cadherin_MopE_like_N 
N-terminal Putative NodB-like catalytic domain of hypothetical proteins containing C-terminal cadherin or MopE copper binding domains
The family includes several cadherin or MopE copper binding domain containing hypothetical proteins found in bacteria. Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium. They play a role in cell fate, signalling, proliferation, differentiation, and migration. The copper binding domain involves a tryptophan metabolite, kynurenine, in the protein MopE. Members of this family contain an additional conserved domain, which is N-terminally fused to the cadherin domain or the MopE copper binding domain. Although its function remains unclear, the conserved domain exhibits a seven-stranded barrel with a detectable sequence similarity to the six-stranded barrel rhizobial NodB-like proteins, which remove N-linked or O-linked acetyl groups from cell wall polysaccharides and belong to the larger carbohydrate esterase 4 (CE4) superfamily.
Statistics
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PSSM-Id: 200560
Aligned: 6 rows
Threshold Bit Score: 459.653
Created: 1-Jun-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative activeputativeNodB motif
Feature 1:putative active site [active site]
Evidence:
  • Comment:based on similarity to other CE4 superfamily members

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                         ##                                                                    
jgi:Sphch_0827      407 RESGIVAARVDMDQSQeledvnppgstpGVYDKLLPILTQWKADYNFVGSFYLNVGNGTng-tgTDWAVSLPYYKALLDL 485  Sphingo...
EGI55575            411 RDAGLFASRIDMDQSQysdevkpedgsaGIYSKLLPILDQWKSLYNFVGSYYVNIGNDPsqqrsTDWSVSAPIYARMMAA 490  Sphingo...
EDM65657            230 RQNNIFVSRTDMDQSMfad------elqETAFPLYDLLGLWKNKYNFVGSYYINIGDKPgqgeyTDWSISAPLYQDYIAL 303  Moritel...
jgi:Rsph17025_4067  880 RGTSLFHSRNDMDQSQeiwdv--veqnpGIYDAMLPIIEDWYERFGFVGSYYVNIGAEPpd-qqTNWAVSLPYYQRILAL 956  Rhodoba...
EAW34922            578 RDEGIFVSRNDMDQSQetfdv--idtnpGIYDALLPILEQWKNDYNFVGSYYINVGNNPpd-qqTDWSISSPYYQEMLAM 654  Lyngbya...
jgi:Saro_1619       397 RDAGLVAARVDMDQSMyied-----vngGIYDQLVPLLQQWKAQYNFVGSFYVNIGDNTqqgiyTDWNKSLPYYTAMIGL 471  Novosph...
Feature 1                     #   #                                                                     
jgi:Sphch_0827      486 GNELGTHSLTHPENTn----------------------------------lLSASQIQTEFQDSTTILNQQISAYLnqpf 531  Sphingo...
EGI55575            491 GNEIGLHSYTHPEDTn----------------------------------vLTAEQIAYEFGAERAELEKQMSAYLgrqv 536  Sphingo...
EDM65657            304 GNEVASHSWTHPDDTa----------------------------------aLSTEQLQYEFQQSNAEITQQLGYVT---- 345  Moritel...
jgi:Rsph17025_4067  957 ESEIGVHSTTHPHDTnelladtpeilalfarvdprnpgavdpasltpaerqLLYSSHIFQFEYSRLLLEQKLGIDI---- 1032 Rhodoba...
EAW34922            655 GNEIGTHSYTHPEDTn----------------------------------pLTPTQLEFEFNQSQFVIEQNLGIDV---- 696  Lyngbya...
jgi:Saro_1619       472 GNEIGTHTYTHPEDTn----------------------------------lLSPSQLQFEFELSTQILEQKLSAALgyay 517  Novosph...
Feature 1                       ###                                                                     
jgi:Sphch_0827      532 qiTGGAVPGAPEslPVSQEIMKYVsDYLTGGYAAQGAGYPNAFGYMTPAdq--tkIYFAPNTsFDFTLIEFQRKTVAEAT 609  Sphingo...
EGI55575            537 slGGAAVPGAPEtiATSQEILKHV-AYLSGGYTGVGAGYPNAFGYMTPGnaadgkVYLAPNTmFDFSLIEFQKKTVAEAE 615  Sphingo...
EDM65657            346 --VGAAIPGNPEtiAVNNQLNNYL-SYVSGRASIIGWGYPGAYGFLTPYhs---mVYLSLSMsPDFTLVGWLNYTPDEAM 419  Moritel...
jgi:Rsph17025_4067 1033 --PGAAVPGAPEklATSREIIRFF-DYLSGGYSGVGAGYPGAFGYLTPDdr--ggVYLAPNMsFDFSLIGFRDMTPEQAS 1107 Rhodoba...
EAW34922            697 --VGAAIPGAPEgfQVSQELKKYL-DYVSGGYSGVGAGYPGAFGLPFEGed---fVYLAPNMkFDFSLVQFEGKTATQAE 770  Lyngbya...
jgi:Saro_1619       518 tiEGAAIPGAPEtlTTSLAIEQYVkTYLTGGYTGQGAGYPNAFGYLTPGsq--dkVYIAPNTfFDFTLFDWLHLSAADAS 595  Novosph...
Feature 1                                      #                                                  
jgi:Sphch_0827      610 AAWIGEFDKLVANAgtPVIVWPWHDYGAadflsgdpttDSPYDISLFTSWIQHAVAanmEFVTLDDLAARMTAV 683  Sphingobium c...
EGI55575            616 AEWGKELATLTAHAdaPVIVWPWHDYGPamwtg-daavKSPYVTSMFTNFIAKAAAagvEFVTLADLAARIGAF 688  Sphingomonas ...
EDM65657            420 QIWQDEYAQQTNHAsqPILHWLWHDYAAt--------nDPAYKPEMIENTIDWAYQhdsEFVTAVEVHNRINRF 485  Moritella sp....
jgi:Rsph17025_4067 1108 AVWAEEYARIASHAttPIFLFPWHDYGPtnwn--igdpSQVYTLEMFESVIARAAAdgaEFVTGADLARRIASF 1179 Rhodobacter s...
EAW34922            771 AIWKQEYNDIANHAgmPIFHWPWHDYGPtnwqtnppnaAPGYTEEMFTNLIAKAYSegaEFVTAADLSERIKTF 844  Lyngbya sp. P...
jgi:Saro_1619       596 ALWQSQYEKIVSQAdsPVVVWPWHDYGAta------fnSPNYAPEIFNTFLAQAAAdgmEFVTLADLANRINAF 663  Novosphingobi...

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