Conserved Protein Domain Family
ChtBD1_GH18_2

?
cd10909: ChtBD1_GH18_2 
Hevein or type 1 chitin binding domain (ChtBD1) subfamily; in some members co-occurs with family 18 glycosyl hydrolases
This subfamily includes a Toxoplasma gondii ME49 protein annotated as a putative mannosyl-oligosaccharide glucosidase. ChtBD1 is a lectin domain found in proteins from plants and fungi that bind N-acetylglucosamine, plant endochitinases, wound-induced proteins such as hevein, a major IgE-binding allergen in natural rubber latex, and the alpha subunit of Kluyveromyces lactis killer toxin. This domain is involved in the recognition and/or binding of chitin subunits; it typically occurs N-terminal to glycosyl hydrolase domains in chitinases, together with other carbohydrate-binding domains, or by itself in tandem-repeat arrangements.
Statistics
?
PSSM-Id: 211315
Aligned: 10 rows
Threshold Bit Score: 67.3993
Created: 12-Jan-2009
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
 
carbohydrate
Feature 1:carbohydrate binding site [chemical binding site]
Evidence:
  • Comment:based on related proteins with structure
  • Comment:Sequence variations in the binding site can affect binding specificity and binding affinity.
  • Comment:Glycines stabilize the site and may not directly contact the substrate

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                                         # ### #    #         
NP_495798     496 EGKRGRCGRDVPPLEGe-APTCNPDDAnAHCCSNGGYCGNSKEHCECNGCIDF 547  nematode
XP_001947887 1084 DDFAGLCGRSAPLYKGy-YPVCDPDDPgYSCCGPSGYCGSGDKYCDCPTCKDF 1135 pea aphid
NP_495798     567 PANVGRCGYNAPRLSTgkIPKCDPDSE-SYCCSNSGYCGKGEQYCSCLGCADF 618  nematode
NP_495798     418 EELAGMCGKSSPLIDGy-YPVCDPDDPgHACCGKYGYCGSGAEFCSCPECIDY 469  nematode
ACO15391       97 TRSDGRCGAGFTLQDGvtPAECDPNSE-YFCCSENNYCGSSQDHCYCEACINY 148  Caligus clemensi
ACO15391      222 ARPDRRCGKDYPLADGt-PAECDPNSS-NPCCSKWGFCGPGSDHCDCPECVDY 272  Caligus clemensi
ACO15391      157 VRSDRRCGKLFPLEDGs-QSECNPKSA-NPCCSAFGYCGPGADHCSCEGCVDF 207  Caligus clemensi
EEA99601      996 WRDDGRCGKEFPISTGr-PAVCNPLSE-SPCCSPAGFCGASPAHCSCSSCFRT 1046 Toxoplasma gondii ME49
EEN58371      250 QIGGWRCGGGHISDYNi-PAKCDPDGI-HPCCSDGGWCGNSPLHCDCAACIDY 300  Florida lancelet
XP_001947887 1162 EGLRGRCGRKIPKINGv-FPTCNPDDEnAYCCSNGNYCGKGADFCDCQGCVNF 1213 pea aphid

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap