Conserved Protein Domain Family
GH57N_PfGalA_like

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cd10794: GH57N_PfGalA_like 
N-terminal catalytic domain of alpha-galactosidase; glycoside hydrolase family 57 (GH57)
Alpha-galactosidases (GalA, EC 3.2.1.22) catalyze the hydrolysis of alpha-1,6-linked galactose residues from oligosaccharides and polymeric galactomannans. Based on sequence similarity, the majority of eukaryotic and bacterial GalAs have been classified into glycoside hydrolase family GH27, GH36, and GH4, respectively. This subfamily is represented by a novel type of GalA from Pyrococcus furiosus (PfGalA), which belongs to the GH57 family. PfGalA is an extremely thermo-active and thermostable GalA that functions as a bacterial-like GalA, however, without the capacity to hydrolyze polysaccharides. It specifically catalyzes the hydrolysis of para-nitrophenyl-alpha-galactopyranoside, and to some extent that of melibiose and raffinose. PfGalA has a pH optimum between 5.0-5.5.
Statistics
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PSSM-Id: 212106
Aligned: 14 rows
Threshold Bit Score: 269.237
Created: 8-Feb-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative activecatalytic site
Feature 1:putative active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             # #                                                                         
YP_383416       6 YTIFHLNLAFSsieEELRPEVVRRCYWPLLRLARDl------nLPFGIEITGYTLETVAAidpAWVEELRELCS-GQCEL 78   Geobacter met...
YP_920670     251 AFVHHGNQHLAd-nRALNKPNAVNSYDYILRVHEElsakagrrIPVCVHMSGTLAASYVWwdpSIVAHLRSLAAkGLACI 329  Thermofilum p...
YP_004175828  250 IMVHHGNQHLTd-nRALNPPSSVNSYGYILYVHEYlsnktgrrIPVSIHMSGTLIASFLWwdpGFISYVKGLTArGLVAI 328  Desulfurococc...
Q8EC76         10 YTVFHLNLAFSsieNEQHGEVIRKCYWPLLQIAQKg-------IPVGIEMTAYTLEAVQQvdpLWVEEFKLLLQkGMCEL 82   Shewanella on...
YP_356535       7 FSIYHLNLMFSsiaEEQRPEVVRRCYWPLLRLIRRy------eLPLGIEASGYTLEAIHAidpAWVAELRDLCEnGPAEF 80   Pelobacter ca...
YP_002990175    4 FAIFHLNLMFSsipEESRPEVIKRCYWPLLKLVEKg-------YPLGIEASGITLEIIRDidpLWIKNFKALLRsGKAEF 76   Desulfovibrio...
YP_001395483    7 YTAFHLNLAFSsipEEQYALAIDRCYWPIISILEEfh-----nIKFGIELTAYTLKKIKEidyTFIEKLKELYNkGRCEI 81   Clostridium k...
ZP_06242272     6 IFMPHANIQYSqldPARRAWVCEHCYRPLFELVRDg------eYRIAFEASGRTLEVMAGetpEVLALLKELIAdGRIEP 79   Victivallis v...
ZP_06112695     6 IFLPHANIQYSqlkMERREWVVKNCYEKLFDLVRDn------qYKIGFEASGKTLDEIERlapEVMEKLKALILdGQVEP 79   Clostridium h...
Q9HHB5          3 ALVFHGNLQYAeipKSEIPKVIEKAYFPTISELIRr------eIPFGLNITGYSLSFLPK---DLIALIKEGIEsGLIEI 73   Pyrococcus fu...
Feature 1                                                    #                                    
YP_383416      79 VGSGYSQMIGPLVPAEVNRQNLRIGNQTYERLLGlRPRIVLVNEQAYs-aGLIGHYREAG-FEAMVMEWDNp-aYHHPQW 155  Geobacter met...
YP_920670     330 VGGTWAEYITAYFYDNFNDPSFYLGKLYAEALFGyTPLTAWIPERTWddeRTGIAYTVSKhYYAVILDGNThhdDWSPNT 409  Thermofilum p...
YP_004175828  329 LGGVWAEHITAYFYDNFNDPSANFTKWYVRQVFGyNPVTAWVPERTWddeRTGIAYTLSKyYSAVILDANThhdEWSPST 408  Desulfurococc...
Q8EC76         83 IASGDSQIIGPLVPAKVNQANLRLGQDTYHTLLGvRPQIAYINEQAVs-aGLLDVYIDQG-FEAVVVEWDNp-ySHNPNW 159  Shewanella on...
YP_356535      81 IGSGYAQIIGPLVPADVNRDNQRLGLQTYKKILGfQPQLALVNEQAYa-aGLIPIYRQAG-YRAIVMEWDNp-gSNHPDW 157  Pelobacter ca...
YP_002990175   77 IGSGYGQIIGPLVPSALNRANLALGRTTGEQILEtIPQIALINEQAWs-aGMADHYLDAG-YSAIFMDYDNp--ARYADW 152  Desulfovibrio...
YP_001395483   82 LGSGVSQAIFPLIPQKVNIKNLEMGNRVYKDILGeVPSTSYVNEQCYs-dGIAEAYCING-YRNLIMDYDN---SNLFNT 156  Clostridium k...
ZP_06242272    80 VGSPFIHVMLANIPPEVALHSLKRGLDAWEAYTGvRPETGWNPECGWa-gSLPELYKEAG-FNNLVMDADSf-fLSFPEI 156  Victivallis v...
ZP_06112695    80 VASPYTHLMMGNVPREVAVHTLLRSLDTWERYTGiRPTVGWNPECSWn-aQIPGIYKEVG-IETLIMDADSf-fLSFPEI 156  Clostridium h...
Q9HHB5         74 LGTSYTHAILPLLPLSRVEAQIKRDREVKENILEvSPEGFWLPELAYd-pIIPAILRDNN-YEYLFADGEAmlfSNHLNS 151  Pyrococcus fu...
Feature 1                                                                                         
YP_383416     156 DPaw--------------------------------------ryLPQIAMGq--hGEELPVIWNnsiffqkfqryvhgel 195  Geobacter met...
YP_920670     410 SPy-----------------------------------------KPHQYDPsktgGRELYVFFIdwemqqll--lantdg 446  Thermofilum p...
YP_004175828  409 NPy-----------------------------------------KPHKYDTsrtaGRTLYVLFIdwdtqqkl--lsntdg 445  Desulfurococc...
Q8EC76        160 SNtl--------------------------------------ldRPQSLQAa--sGRTIKVIWNhaiafqkfqryvhgel 199  Shewanella on...
YP_356535     158 DPdw--------------------------------------ryLPQHALGp--dGTALPVIWNksipfqkfqrythgei 197  Pelobacter ca...
YP_002990175  153 DEhi--------------------------------------qhFPQRAKGt--nGESIPVIWSrsmvfqklqrfahrel 192  Desulfovibrio...
YP_001395483  157 YPkef-------------------------------------kyKSHKIKTs---RGELNLLWNnsiafqkfqryafgqi 196  Clostridium k...
ZP_06242272   157 REatglaydvqghsnknhlfkieeyirnrpeylrfltnpsvapnGLNMIFRs--dCMANPMLWYlmgategc---retpv 231  Victivallis v...
ZP_06112695   157 RKatglcydvqghsnknqlflieeyikdkpeylkyltnpsicddGLKLIFRs--dCMANLLLWYlmgategv---rneav 231  Clostridium h...
Q9HHB5        152 AIkpikplyphlikaqrgeglv---ylnyllglrelkkainlvfEGKVTLEav-kEIEAIPVWVsintavm----lgagr 223  Pyrococcus fu...
Feature 1                                     #                                                   
YP_383416     196 elDDYLALIGRHdng---ttrAIPLYGNDIEIFdfrpgrf------tteavmeHDEWGRIRELFERLLEe-----gRFTF 261  Geobacter met...
YP_920670     447 glNINLRRKLAWaatn-adqqMLFLYADDWEKAagisspswd--pgnpyryrdSLTWIAMHPWIQVVTVdevvgwlRSGS 523  Thermofilum p...
YP_004175828  446 glHMDLRRKYIWaatn-sdqqMVFIYADDWEKAagiagwyt----gnpylynnSLTWIAMHPWIQVVTTddvvnwlNSGA 520  Desulfurococc...
Q8EC76        200 tlEDYLHYLVKIfkp---gmlAFPVYGSDAEVFdfrpgry------qteadhvEGEWQRISTLFNTLAEm-----nNYCW 265  Shewanella on...
YP_356535     198 elPEYLDFLSSHrnd---dprTFALYGNDAEIFdfrpgrfd-----teaeigeKSEWLRIAQLYKALLSd-----nRFSL 264  Pelobacter ca...
YP_002990175  193 elDEYLSYVEDLgtg----egWLPIYGNDAEIFdfrprryk-----neavqeaESEWKLIEQVFEILLKr------GHEF 257  Desulfovibrio...
YP_001395483  197 tmEEYLRYLNAQfnek--eerILCMYGSDLEIFdykpgnyd-----wfynpkaSVEIDRIKKIFKFLNNh-----dKFEF 264  Clostridium k...
ZP_06242272   232 glDEIQSMLETWrgrighsgsFIMPYAEDAEYIgssayfyvkqfnqarffepePGSVTRFRQLLDLARNt------GYEL 305  Victivallis v...
ZP_06112695   232 ryEEIQSMFCRWnaraqetgsFIMPYAEDAEYIgssayfyvkqfnqarffeeeGDSLKRFKEIMDLSIEs------GFVP 305  Clostridium h...
Q9HHB5        224 fpLMNPKKVAKWvke----kdEILLYGTDIEFLgyr---------------diAGYKITISNLLEIINEl------EGEL 278  Pyrococcus fu...
Feature 1                                                 #         #  
YP_383416     262 IPPSRLLSLlhepgagnrlslespeapipvkkqekYNITRWAv-TGRDDIGIN 313  Geobacter metallireducens GS-15
YP_920670     524 WTPVKYYYCgydtyyylktw----vpgypydyrraYDGWYWGtsSAKSFAWYG 572  Thermofilum pendens Hrk 5
YP_004175828  521 WSPVTGYYCgydtyqylktw----vqnypydyrraYDGWYWGtsSEKSFAWYG 569  Desulfurococcus mucosus DSM 2162
Q8EC76        266 QLPQHILKFwqgsnaveitna---ehpvsvkkqakYNVSRWGl-SGRNDLLLN 314  Shewanella oneidensis
YP_356535     265 IGPHKVLDFlecpgagnrlrletaaqpvpvkkqakYNVVRWGl-TGRDDMALN 316  Pelobacter carbinolicus DSM 2380
YP_002990175  258 QLPSTVLNGlehkyggkelelscasqpipvkkqskYNITRWAl-SGRDDFQLN 309  Desulfovibrio salexigens DSM 2638
YP_001395483  265 ILPKDAAEEinsgkfisistp---eyplvckkqpkYNAVRWAv-SGLKNTKMN 313  Clostridium kluyveri DSM 555
ZP_06242272   306 STPSDVIASaatpivn-------------drvdciENGAAWH--GGTSKAWAN 343  Victivallis vadensis ATCC BAA-548
ZP_06112695   306 ATPSEVVESaellen--------------pfilkiENGAAWH--GGTAKAWLN 342  Clostridium hathewayi DSM 13479
Q9HHB5        279 GLPRKIKHSekk---------------------lyLRTSSWAp-DKSLRIWTE 309  Pyrococcus furiosus

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