Conserved Protein Domain Family
TNFRSF11B

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cd10581: TNFRSF11B 
Tumor necrosis factor receptor superfamily member 11B (TNFRSF11B), also known as Osteoprotegerin (OPG)
TNFRSF11B (also known as Osteoprotegerin, OPG, TR1, OCIF) is a secreted glycoprotein that regulates bone resorption. It binds to two ligands, RANKL (receptor activator of nuclear factor kappaB ligand, also known as osteoprotegerin ligand, OPGL, TRANCE, TNF-related activation induced cytokine), a critical cytokine for osteoclast differentiation, and TRAIL (TNF-related apoptosis-inducing ligand), involved in immune surveillance. Therefore, acting as a decoy receptor for RANKL and TRAIL, OPG inhibits the regulatory effects of nuclear factor-kappaB on inflammation, skeletal, and vascular systems, and prevents TRAIL-induced apoptosis. Studies in mice counterparts suggest that this protein and its ligand also play a role in lymph-node organogenesis and vascular calcification. Circulating OPG levels have emerged as independent biomarkers of cardiovascular disease (CVD) in patients with acute or chronic heart disease. OPG has also been implicated in various inflammations and linked to diabetes and poor glycemic control. Alternatively spliced transcript variants of this gene have been reported, although their full length nature has not been determined.
Statistics
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PSSM-Id: 276907
Aligned: 9 rows
Threshold Bit Score: 262.407
Created: 13-Jun-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:CRD1 [structural motif]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        ##    #########       #######  ######################  ####                     
NP_002537      6 CCa--lVFLDISIKWttqetfpPKYLHYDEeTSHQLLCDKCPPGTYLKQHCTAkwKTVCAPCPDhYYTDSWHTSDECLYC 83  human
XP_003224876   6 YCt--lVLLDISVKWtiqeapsLKFPHYDPmTSRQLMCDQCPPGTYVKQNCTAssKTKCSPCPDqYYADDWNSNEECQYC 83  green anole
XP_002200464   6 CCa--lVLLDISVKWtfqddsaPKYLHYDPgTSRQLLCDQCPPGSYVKQHCSAssPTQCAPCPAqYYADEWNSNEECQYC 83  zebra finch
AAZ06361       6 CCt--lVLLDISVKWsiqdispPKYLHYDPgTSRQVMCNQCPPGSYVKQHCTAasPTVCAPYPDqYYAEDWNSNDECQYC 83  chicken
AAH74428       7 RTl--lVLLHISLAKgns--vpQKYSHYDPrTSMYLQCDHCPPGTYVKQDCSTekNTECAPCPShHYNDRWNSNTECQFC 82  African clawed ...
XP_001509572  59 GCgs-wMFLGISVKWtfqeifpPKYLHYDPaTARQLTCNQCPPGTFVKRHCSAsrQTLCAPCPEsHYAGEWHSDEECQYC 137 platypus
XP_006636132  12 MKl--hVLFAISFTWafhevpvPKYQHWDPvASQFYVCDQCPPGTALQEHCSStrPTVCSPCPEhHFSEHWHWDDKCQYC 89  spotted gar
EMP29701      83 SCvpqpVFLDIYVKWttqetapPKYLHYDPvTSRQLMCDLCSPGTYVKQHCTAtkKTECAPCPNqYYAEDWNSNDECQYC 162 green sea turtle
EPY79682     101 GTqp-gEFLDLSIKWttqetfpPKYLHYDPeTSRQLMCDKCPPGTFLKQHCTArrKTVCAPCPDhHYTDRWHTSDECLYC 179 Wild Bactrian c...
Feature 1                                                                               
NP_002537     84 sPVCKELQYVKQECNRTHNRVCECKEGrYLEIEFCLKHRSCPPGFGVVQa--GTPERNTVCKRCPDGFFSN 152 human
XP_003224876  84 nVVCNELQYEKVECSSTKNRICECVEGrYLELEFCLKHTACPPGFGVVQq--GTPERNTVCESCPEGYFSN 152 green anole
XP_002200464  84 sTVCKELQFVRQECSSTQNRVCECVPGrYLELEFCLRHTECPPGSGVAQa--GTPESDTVCERCPDGFFSN 152 zebra finch
AAZ06361      84 sAVCKELQYIKQECTSTQDRVCECIEGwYLELEFCLKHTECPPGFGVAQp--GTPESDTVCKSCPEGFFSN 152 chicken
AAH74428      83 nVVCKELQYVKQQCNSTHNRLCECAAGfYLDLEFCVPHKKCHPGYGVAQe--GTPESDTVCRPCPEGTFSD 151 African clawed frog
XP_001509572 138 nTVCKELQYVRQECNSTHNRLCECVKGrYLDLEFCLRHTVCAPGFGAVRp--GRCPRHTVRPLGENPTGSV 206 platypus
XP_006636132  90 tTVCKEKQRVRQECNSTHNRICECIEGyHLEIEFCVKHTACQPGFGVKIp--GTPESDTVCEICPNGYYSS 158 spotted gar
EMP29701     163 nVVCKELQYVKQECNSTQNRICECIEGrYLELEFCLRHTECPPGFGVVQp--GTPESDTICQRCPEGFFSN 231 green sea turtle
EPY79682     180 sPVCKELQYVKQECNRTHNRVCECVEGrYLELEFCLKHRSCPPGFGVLQvdvTLCEEAFFRFAVPTKLTPN 250 Wild Bactrian camel

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