Conserved Protein Domain Family
EphR_LBD_A3

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cd10481: EphR_LBD_A3 
Ligand Binding Domain of Ephrin type-A Receptor 3
Ephrin receptors (EphRs) comprise the largest subfamily of receptor tyrosine kinases (RTKs). Class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphA3 has been implicated in leukemia, lung and other cancers. EphRs contain a ligand binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyrosine kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion.
Statistics
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PSSM-Id: 198449
Aligned: 4 rows
Threshold Bit Score: 373.236
Created: 9-Jun-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
ephrin binding
Feature 1:ephrin binding site [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                # #####      ## # #                              # #    
P29319        29 EVNLLDSKTIQGELGWISYPSHGWEEISGVDEHYTPIRTYQVCNVMDHSQNNWLRTNWVPRNSAQKIYVELKFTLRDCNS 108  house mouse
XP_002931819  29 EVNLLDSKAIQGELGWISYPSHGWEEISGVDENYTPIRTYQVCNVMDHNQNNWLRTNWIPRNAAQKIYIELKFTLRDCNS 108  western clawed...
NP_990761     28 EVNLLDSKTIQGELGWISYPSHGWEEISGVDEHYTPIRTYQESNVMDHSQNNWLRTNWIPRNSAQKIYVELKFTLRDCNS 107  chicken
XP_002667875  28 EVNLLDSKASQGELGWISSPSHGWEEISGVDEHYTPIRTFQVCNVMEYSQNNWLRTNWIPRNSAQKIYVELKFTLRDCNS 107  zebrafish
Feature 1        ##                                         #   ##  ###                          
P29319       109 IPLVLgTCKETFNLYYMESDdhg-vkFREHQFTKIDTIAADESFTQMDLGDRILKLNTEIREVGPVNKKGFYLAFQDVGA 187  house mouse
XP_002931819 109 IPLVLgTCKETFNLYYMESDedqgvkFREHQFTKIDTIAADESFTQMDLGDRILKLNTEVREVGPISMKGLYLAFQDVGA 188  western clawed...
NP_990761    108 IPLVLgTCKETFNLYYMESDddhlakFREHQFTKIDTIAADESFTQMDLGDRILKLNTEVREVGPVSKKGFYLAFQDVGA 187  chicken
XP_002667875 108 IPMVL-TCKETFNLHYLETEedqgnkFREHQFSKIDTIAADESFTQMDLGDRILKLNTEVREVGPMTKKGFYLAFQDVGA 186  zebrafish
Feature 1        ### #        
P29319       188 CVALVSVRVYFKK 200  house mouse
XP_002931819 189 CVALVSVRVYFKK 201  western clawed frog
NP_990761    188 CVALVSVRVYFKK 200  chicken
XP_002667875 187 CVALVSVRVYFKK 199  zebrafish

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