Conserved Protein Domain Family
EphR_LBD_A1

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cd10479: EphR_LBD_A1 
Ligand Binding Domain of Ephrin type-A Receptor 1
Ephrin receptors (EphRs) comprise the largest subfamily of receptor tyrosine kinases (RTKs). Class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphA1 is downregulated in some advanced colorectal and myeloid cancers and upregulated in neuroblasoma and glioblastoma. EphRs contain a ligand binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyrosine kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion.
Statistics
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PSSM-Id: 198447
Aligned: 3 rows
Threshold Bit Score: 376.681
Created: 9-Jun-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
ephrin binding
Feature 1:ephrin binding site [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                 # #####     ## # #                                # #  
NP_076069     28 EVTLMDTSTAQGELGWLLDPPETGWSEVQQMLNGTPLYMYQDCPIQegGDTDHWLRSNWIYRGEEASRIYVELQFTVRDC 107  house mouse
XP_003202667  29 EVNLLDTSTAQGELGWLPDPPEVGWSEVQQMINGTPVYMYQDCSVLseGDTDHWLRTNWIYRGEAASRIYVELKFTVRDC 108  turkey
EAW51845      27 EVTLMDTSKAQGELGWLLDPPKDGWSEQQQILNGTPLYMYQDCPMQgrRDTDHWLRSNWIYRGEEASRVHVELQFTVRDC 106  human
Feature 1          ##                                           #   ##  ###                      
NP_076069    108 KSFPGgagpLGCKETFNLFYMESDQDVGIQLRRPLFQKVTTVAADQSFTIRDLASGSVKLNVERCSLGHLTRRGLYLAFH 187  house mouse
XP_003202667 109 KSFKGe--vVTCKETFNLYYMESEQDVGIQFRRPMFIKLNTVAADRSFTNRDIESGAMQLNTEVCPIGKLSRRGFYLAFQ 186  turkey
EAW51845     107 KSFPGgagpLGCKETFNLLYMESDQDVGIQLRRPLFQKVTTVAADQSFTIRDLASGSVKLNVERCSLGRLTRRGLYLAFH 186  human
Feature 1            ### #        
NP_076069    188 NPGSCVALVSVRVFYQR 204  house mouse
XP_003202667 187 NSGACVAMVSVRVYYKT 203  turkey
EAW51845     187 NPGACVALVSVRVFYQR 203  human

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