Conserved Protein Domain Family
GIY-YIG_AtGrxS16

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cd10457: GIY-YIG_AtGrxS16 
GIY-YIG domain found in CAXIP1-like proteins
The family includes CAX-interacting protein-1 (CXIP1)-like proteins which contain a GIY-YIG domain that shows statistically significant similarity to the N-terminal catalytic domains of GIY-YIG family of intron-encoded homing endonuclease I-TevI and catalytic GIY-YIG domain of nucleotide excision repair endonuclease UvrC. CAXIP1 is a novel PICOT (protein kinase C-interacting cousin of thioredoxin) domain-containing Arabidopsis protein that activates H+/Ca2+ exchanger CAX1, and its homolog CAX4, but not CAX2 or CAX3.
Statistics
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PSSM-Id: 198404
Aligned: 4 rows
Threshold Bit Score: 134.213
Created: 23-Jan-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
GIY-YIG
Feature 1:GIY-YIG motif/motif A
Evidence:
  • Comment:consensus: GIYX(10,11)YIG used to define GIY-YIG nuclease superfamily.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        ###          ###                                                           
Q8H7F6        88 GVYAVYDksdeLQFVGISRNIAASVSAHLKs-vPELCGSVKVGIVEEPdKAVLTQAWKLWIEEHIkvtGKVPPGN 161 thale cress
EFN56086      92 GVYAVYDssgtLHYLGLSRKIAVSLATHVEalpEGLVHSVKVLEVPEAsKEELQEAWKAWMQEAVaeaGAIPPGN 166 Chlorella variabilis
XP_001689744  67 GVYAVYDkngtLQYIGLSRKVSASVATHMQe-lPDLTGSIKYNIVDDAsREGLTAAWKSWVEETVaeaGIIPPGN 140 Chlamydomonas reinha...
XP_001785320  36 GIYAVYDkagdLQYIGLSRRVSASLQSHMRe-lPELCASAKFAVVDAPeRAALTDAWKSWMEEHInqgGNVPPGN 109 Physcomitrella paten...

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