Conserved Protein Domain Family
GIY-YIG_COG3410
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cd10439: GIY-YIG_COG3410 
GIY-YIG domain of uncharacterized bacterial protein structurally related to COG3410
This family contains a group of uncharacterized bacterial proteins. Although their function roles have not been recognized, these proteins contain a putative GIY-YIG domain in their N-terminus. Moreover, a conserved domain COG3410 with unknown function has been found in the C-terminus of most family members.
Links
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Statistics
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PSSM-Id: 198386
Aligned: 33 rows
Threshold Bit Score: 80.3658
Created: 20-Oct-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
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putative activeputative metalGIY-YIG
Feature 1:putative active site [active site]
Evidence:
  • Comment:Based on similarity to the sequence of Enterobacteria phage T4 homing endonuclease I-Tevi (1LN0).
Scroll to Sequence Alignment Display
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Feature 1             #                   # #       #   #                            #           
NP_244863     26 NYPIVYILYNek--------kRPTAYIGQTvQPTRRLKNHIEDkrrrslsRLILIGHEKFNQSATYNIESNLINYFiadN 97  Bacillus halodu...
AAQ19826      31 NWPLVYILSDe---------kTCRAYVGETtDTITRLGTHLKHpqkqsltTVHLVSSERFNKSATLDIESSLIKYMsadG 101 Alcaligenes fae...
ZP_06985917   30 KWPVVYIIEDk---------gKRLAYIGETtNICNRINQHWNNpkrkklkSIHIIHNPAFNKSVILDLEAFLIKYIasdG 100 Bacteroides sp....
ZP_08555117   25 NWPVVYILED-----------GKEAYVGETiNAFNRSKEHYKNsdrkklnNIHIISDNEFNKSATLDLESSLIEYMsadG 93  Haloplasma cont...
ZP_08090688   39 SYPIVYILYN-----------NSKIYIGESsRFLKRVKEHSNIikreklkQLLIIYGTLFNASVIKELETALIACFl-aE 106 Clostridium sym...
ZP_01075030   30 QWPVVYLLSGgk-------kkKKLAYIGEStNVTSRMKAHLSHvekselnSLQLISSDKFNKSAALDIESKLIRYIaadG 102 Marinomonas sp....
ZP_03634386   25 QYPSVYILSG-----------KNEAYVGETiNIAHRLQQHIRNadrrrldQLRVIMDKQFNKSATTDIEASLIKYLsadG 93  Holdemania fili...
ACS31443      31 DWPAVYVIDN-----------EKQVYVGETtNVVARRGQHHMDprkarltTMRVVLHDEFNKSAALDLERYLIQMLsgdG 99  Micrococcus lut...
YP_004580555  33 SYPIVYILYDl---------nTSIAYVGEStNAISRMTNHLSHpdkkklkYLYIISSKNFNKSAALDIESNLIKYMvadE 103 Lacinutrix sp. ...
YP_001711417  28 NWPVVYVLDGppsgqrargrvRDDLYVGESlRAAARLAQHLKSdarghlaTARVIVGENFNKSVCLDFESRLINLFsgdG 107 Clavibacter mic...

Feature 1             #
NP_244863     98 HYQLQN 103 Bacillus halodurans C-125
AAQ19826     102 RFNLLN 107 Alcaligenes faecalis
ZP_06985917  101 KYQLQN 106 Bacteroides sp. 3_1_19
ZP_08555117   94 IFKLQN 99  Haloplasma contractile SSD-17B
ZP_08090688  107 KRKVLN 112 Clostridium symbiosum WAL-14163
ZP_01075030  103 QFDLIN 108 Marinomonas sp. MED121
ZP_03634386   94 QFRLQN 99  Holdemania filiformis DSM 12042
ACS31443     100 AREVLN 105 Micrococcus luteus NCTC 2665
YP_004580555 104 TFVLLN 109 Lacinutrix sp. 5H-3-7-4
YP_001711417 108 AYTVLN 113 Clavibacter michiganensis subsp. sepedonicus

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