Conserved Protein Domain Family
RNase_RNase-L

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cd10423: RNase_RNase-L 
RNase domain (also known as the kinase extension nuclease domain) of RNase L
Ribonuclease L (RNase L), sometimes referred to as the 2-5A-dependent RNase, is a highly regulated, latent endoribonuclease (thus the 'L' in RNase L) and is widely expressed in most mammalian tissues. It is involved in the mediation of the antiviral and pro-apoptotic activities of the interferon-inducible 2-5A system, which blocks infections by certain types of viruses through cleavage of viral and cellular single-stranded RNA. RNase L is unique in that it is composed of three major domains; N-terminus regulatory ankyrin repeat domain (ARD), followed by a linker, a protein kinase (PK)-like domain and a C-terminal ribonuclease (RNase) domain. The RNase domain has homology with IRE1, also containing both a kinase and an endoribonuclease, that functions in the unfolded protein response (UPR). RNase L has been shown to have an impact on the pathogenesis of prostate cancer; the RNase L gene, RNASEL, has been identified as a strong candidate for the hereditary prostate cancer 1 (HPC1) allele. The broad range of biological functions of RNase offers a possibility for RNase L as a therapeutic target.
Statistics
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PSSM-Id: 199218
Aligned: 8 rows
Threshold Bit Score: 168.803
Created: 16-Jun-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:putative kinase interface [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #                                                                             
Q05823       590 ESRYRTLRNVGNESDiktrksESEILRLLQPGPSEhsksFDKWTTKINecVMKKMNkfy-ekRGNFYQNTVGDLLKFIRN 668 human
NP_001166526 584 ENRYRTLRNVGNESDikmrksDSEILNLLQLESSEcsrsFAKWTDKIDksVMKSMNkfy-kkKKTFYQDSVGDLLKFIRN 662 domestic guinea...
NP_036012    588 ENRYRTLRNVGNESDikvrkcKSDLLRLLQHQTLEpprsFDQWTSKIDknVMDEMNhfyekrKKNPYQDTVGDLLKFIRN 667 house mouse
NP_001091018 589 ENRYRTLRDVGNESDikqrlrNSRIVQLLQLENSEcsrtFAQWTSKIDkyVMTVMNkfy-ekKRNFYEDTPSDLLKFIRN 667 dog
XP_002919428 588 ENRYRTLRDVGNESDikrqleESKIVQLLQPEKSEcsksFARWTSKMDkyVMDEMNnfy-rnRKHVYTDSLSDLLKFIRN 666 giant panda
NP_001026438 560 QRKFNTLKNIWNKIKdltdddKKDAYNTLNAGEPIp---YPNWTKQIDpeILCIMSnss-vgKKFIYTEKITDLLRLIRN 635 chicken
XP_001375164 581 KTRYRFLRDVGNESDiktrneSSILLRELNSTDHTrn-sVCPCSKIDKy-IMESMNsy--ykNRPSYRETVGDLLKFIRN 656 gray short-tail...
XP_003208614 593 QKKFNVLKHIWNKIKdltgddRKDAFDTLNAGKPIl---YPNWTEQIDqeILYIMTtrs-dgRKFFYKKDITNLLRFIRN 668 turkey
Feature 1                                #   #  ##   #   
Q05823       669 LGEHideeKHKKMKLKIGDPSLYFQKTFPDLVIYVYTKLQ 708 human
NP_001166526 663 IGEHideeKNKWMKEIIGEPSHYFQKTFPDLVIYVYTKLR 702 domestic guinea pig
NP_036012    668 IGEHineeKKRGMKEILGDPSRYFQETFPDLVIYIYKKLK 707 house mouse
NP_001091018 668 LGEHinedKNKEMRLIIEEPSRYLQMKFPDLVIYVYKKLQ 707 dog
XP_002919428 667 LGEHineeKNKEMRLRIGEPFQYLQSTFPDLVMYVYKKLR 706 giant panda
NP_001026438 636 LDEH----PNKRISEITGDYAEYFLKLFPKLTIYVYNRLR 671 chicken
XP_001375164 657 IGEHidekKNEWMKKKTGEPSKYFQKTFPDLVIYVYQKLR 696 gray short-tailed opossum
XP_003208614 669 LDEH----PDKRISEIAGDYAEYFLKLFPKLTIHAYNRLR 704 turkey

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