Conserved Protein Domain Family
SH2_Nck1

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cd10408: SH2_Nck1 
Src homology 2 (SH2) domain found in Nck
Nck proteins are adaptors that modulate actin cytoskeleton dynamics by linking proline-rich effector molecules to tyrosine kinases or phosphorylated signaling intermediates. There are two members known in this family: Nck1 (Nckalpha) and Nck2 (Nckbeta and Growth factor receptor-bound protein 4 (Grb4)). They are characterized by having 3 SH3 domains and a C-terminal SH2 domain. Nck1 and Nck2 have overlapping functions as determined by gene knockouts. Both bind receptor tyrosine kinases and other tyrosine-phosphorylated proteins through their SH2 domains. In addition they also bind distinct targets. Neuronal signaling proteins: EphrinB1, EphrinB2, and Disabled-1 (Dab-1) all bind to Nck-2 exclusively. And in the case of PDGFR, Tyr(P)751 binds to Nck1 while Tyr(P)1009 binds to Nck2. Nck1 and Nck2 have a role in the infection process of enteropathogenic Escherichia coli (EPEC). Their SH3 domains are involved in recruiting and activating the N-WASP/Arp2/3 complex inducing actin polymerization resulting in the production of pedestals, dynamic bacteria-presenting protrusions of the plasma membrane. A similar thing occurs in the vaccinia virus where motile plasma membrane projections are formed beneath the virus. Recently it has been shown that the SH2 domains of both Nck1 and Nck2 bind the G-protein coupled receptor kinase-interacting protein 1 (GIT1) in a phosphorylation-dependent manner. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.
Statistics
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PSSM-Id: 198271
Aligned: 4 rows
Threshold Bit Score: 214.509
Created: 26-May-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
phosphotyrosinehydrophobic
Feature 1:phosphotyrosine binding pocket [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                 #                  # ###     #            #                            
NP_001177725 216 NPWYYGKVTRHQAEMALNERGHEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLKETVYCIGQRKFSTMEELVEHYKKA 295 human
CBN82003     294 KEWYYGKVTRHQAEVALNQRGIEGDFLIRDSESSPNDFSISLKAQSKNKHFKVQLKENLYCIGQRKFNSMEELVEHYKKA 373 European seabass
AAC60143     280 NQWYYGKVTRHQAEMALNERGNEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVCMKDCMYCIGQRKFSTMEELVEHYKKA 359 African clawed ...
NP_001090291 280 NPWYYGKVTRHQAEMALNERGNEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQMKDCVYCIGQRKFSSLEELVEHYKKA 359 African clawed ...
Feature 1                         
NP_001177725 296 PIFTSEQGEKLYLVKHL 312 human
CBN82003     374 PIFTSEQGDKLYLIKAL 390 European seabass
AAC60143     360 PIFTSEQGEKLYLIKPL 376 African clawed frog
NP_001090291 360 PIFTSEQGEKLYLIKAL 376 African clawed frog

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