Conserved Protein Domain Family
SH2_Src_Lyn

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cd10364: SH2_Src_Lyn 
Src homology 2 (SH2) domain found in Lyn
Lyn is a member of the Src non-receptor type tyrosine kinase family of proteins and is expressed in the hematopoietic cells, in neural tissues, liver, and adipose tissue. There are two alternatively spliced forms of Lyn. Lyn plays an inhibitory role in myeloid lineage proliferation. Following engagement of the B cell receptors, Lyn undergoes rapid phosphorylation and activation, triggering a cascade of signaling events mediated by Lyn phosphorylation of tyrosine residues within the immunoreceptor tyrosine-based activation motifs (ITAM) of the receptor proteins, and subsequent recruitment and activation of other kinases including Syk, phospholipase C2 (PLC2) and phosphatidyl inositol-3 kinase. These kinases play critical roles in proliferation, Ca2+ mobilization and cell differentiation. Lyn plays an essential role in the transmission of inhibitory signals through phosphorylation of tyrosine residues within the immunoreceptor tyrosine-based inhibitory motifs (ITIM) in regulatory proteins such as CD22, PIR-B and FC RIIb1. Their ITIM phosphorylation subsequently leads to recruitment and activation of phosphatases such as SHIP-1 and SHP-1 which further down modulate signaling pathways, attenuate cell activation and can mediate tolerance. Lyn also plays a role in the insulin signaling pathway. Activated Lyn phosphorylates insulin receptor substrate 1 (IRS1) leading to an increase in translocation of Glut-4 to the cell membrane and increased glucose utilization. It is the primary Src family member involved in signaling downstream of the B cell receptor. Lyn plays an unusual, 2-fold role in B cell receptor signaling; it is essential for initiation of signaling but is also later involved in negative regulation of the signal. Lyn has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.
Statistics
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PSSM-Id: 198227
Aligned: 12 rows
Threshold Bit Score: 228.33
Created: 17-May-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:phosphotyrosine binding pocket [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                   #                   #                         # #                    
NP_002341    125 ETEEWFFKDITRKDAERQLLAPGNSAGAFLIRESETLKGSFSLSVRDFDPVHGDVIKHYKIRSLDNGGYYISPRITFPCI 204 human
NP_001079115 101 ETEEWFFKDLTRKDAERQLLAPGNNPGAFLIRESETSKGSYSLSIRDCDPQTGDVIKHYKIRTLDNGGYYISPRITFTSI 180 African clawed ...
NP_001104568 104 ETEEWFFKDITRKDAERQLLAPGNSAGAFLIRESETLKGSFSLSVRDYDPMHGDVIKHYKIRSLDNGGYYISPRITFPCI 183 Norway rat
NP_110484    125 ETEEWFFKDITRKDAERQLLAPGNSAGAFLIRESETLKGSFSLSVRDYDPMHGDVIKHYKIRSLDNGGYYISPRITFPCI 204 Norway rat
NP_034877    104 ETEEWFFKDITRKDAERQLLAPGNSAGAFLIRESETLKGSFSLSVRDYDPMHGDVIKHYKIRSLDNGGYYISPRITFPCI 183 house mouse
NP_001104566 125 ETEEWFFKDITRKDAERQLLAPGNSAGAFLIRESETLKGSFSLSVRDYDPMHGDVIKHYKIRSLDNGGYYISPRITFPCI 204 house mouse
NP_001017235 101 ETEEWFFKDITRKDAERQLLAPGNNPGAFLIRESETSKGSYSLSIRDYDPKTGDVIKHYKIRTLDNGGYYISPRITFTSI 180 western clawed ...
NP_001104567 104 ETEEWFFKDITRKDAERQLLAPGNSAGAFLIRESETLKGSFSLSVRDFDPVHGDVIKHYKIRSLDNGGYYISPRITFPCI 183 human
XP_003224344 126 ETEEWFFKDITRKDAERQLLAPGNAPGAFLIRESETLKGSYSLSIRDQDAQHGDVVKHYKIRSLDNGGYYISPRITFPCI 205 green anole
NP_001171211 125 ETEEWFFKDITRKDAERQLLAPGNSAGAFLIRESETLKGSYSLSVRDYDPVHGDVIKHYKIRSLDNGGYYISPRITFPCI 204 cattle
NP_001004543 123 ETEEWFYKDITRKDAERQLLAPANKPGSYLIRESETSKGSYSLSIRDVDAQGQDVVKHYKIRSLDNGGYYISPKITFSDI 202 zebrafish
NP_001135273 128 ETEEWFFKDITRKDAERQLLAPANKAGSYLIRESETSKGSYSMSIRDVDAQGINAVKHYKIRTLDNGGFYISPKITFPDI 207 Atlantic salmon
Feature 1                             
NP_002341    205 SDMIKHYQKQADGLCRRLEKA 225 human
NP_001079115 181 NEMIQHYQKQADGLCRKLDKP 201 African clawed frog
NP_001104568 184 SDMIKHYQKQSDGLCRRLEKA 204 Norway rat
NP_110484    205 SDMIKHYQKQSDGLCRRLEKA 225 Norway rat
NP_034877    184 SDMIKHYQKQSDGLCRRLEKA 204 house mouse
NP_001104566 205 SDMIKHYQKQSDGLCRRLEKA 225 house mouse
NP_001017235 181 CDMIQHYQKQADGLCRKLDKP 201 western clawed frog
NP_001104567 184 SDMIKHYQKQADGLCRRLEKA 204 human
XP_003224344 206 SDMIKHYQKQSDGLCRKLEKA 226 green anole
NP_001171211 205 SDMIKHYQKQSDGLCRRLEKA 225 cattle
NP_001004543 203 SSMIKHYHKQSDGLCRKLDKA 223 zebrafish
NP_001135273 208 GSMIKHYYKQSDGLCRKLEKP 228 Atlantic salmon

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