Conserved Protein Domain Family
SLC5sbd_PanF

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cd10327: SLC5sbd_PanF 
Na(+)/pantothenate cotransporters: PanF of Escherichia coli and related proteins; solute binding domain.
PanF catalyzes the Na+-coupled uptake of extracellular pantothenate for coenzyme A biosynthesis in cells. This subfamily belongs to the solute carrier 5 (SLC5) transporter family.
Statistics
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PSSM-Id: 212037
Aligned: 25 rows
Threshold Bit Score: 489.41
Created: 4-Dec-2008
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Na binding site
Feature 1:Na binding site [ion binding site]
Evidence:
  • Comment:based on the structures of Vibrio parahaemolyticus vSGLT (SLC5), Aquifex aeolicus LeuT (SLC6), and the NCS1, Microbacterium liquefaciens Mhp1, bound with Na+, functional studies of Escherichia coli PutP (SLC5) and mammalian NIS (SLC5), and mutational analysis of vSGLT
  • Comment:one of two Na+ binding sites in Aquifex aeolicus LeuT, where it is referred to as the Na binding site 2

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                               #  #                  
NP_755889   5 VILPLVAYLVVVFGIsvyam---------rkrnTGTFLNEYFLGSRsMGGIVLAMTLTATYISASSFIGGPGAAYKYG-L 74  Escherichia coli C...
NP_979864   5 VIIPMIISFIVVFLIgvyasr------rvqataHNKFLQEYFLGGReLGGLLLAMTMIATYGSASSFIGGPGIAYNMG-L 77  Bacillus cereus AT...
EFY05165    6 NILPALAFLLILLSIsayiqr------tskenrQKDFAKDYFIGGRtLGGFVLAMTTAATYSSVSTFVGGPGVAWVIG-Y 78  Phascolarctobacter...
EEX48363    8 TLVPVVVYFAAMYAIgfyasamvnraskrkggsGSAFLEEYMIGGRsTGGFVLAMTLVSTYLSAGSFIGGPGTAYRHG-L 86  Jonquetella anthro...
EGL83834    5 VLLPIFIYLFATFIIgiylhk-------ylkkrKTDFQEEFFVGGRsLGPIVLAFTMLASAASVGTFIGSPGMAYNVG-F 76  Caldalkalibacillus...
EGF85689   10 LILFATIFLAIILLPlmmnrm-------skaehHGGFFEKYYLADRkVSGIVLAITLMSTYGSASTFLGGPGVAYKLG-Y 81  Gemella haemolysan...
EDM50258    8 ILSVFLVYLLFNVIVsfvysr------kaekslNTSEEKKYFIGGRnMNGIVLAMTIMATYTSASSFISGPGAAGLTYgY 81  Eubacterium ventri...
EFM22674    7 VLLPLLGFMAGMLALgfyvr---------rqsaAGGFLSTYFVGGQsLGGFVLAMTMVATYSSVSSFVGGPGMAYEIG-F 76  Selenomonas sp. or...
EEG51842   11 TLVIFIIYSVLLLGVgfyyrq------kskketSGDFSKNFFSGGRaMGPLVVGMMLGASVCSSGTFIGGPATGTKEG-L 83  Clostridium aspara...
AEE91986   10 VIISFIVYSLILLGIgeysrr------smaktkLDDYLSEFYTGGRgMGTLVIVFMLAAGLCSAGTFLGSPGLAYSVG-L 82  Tepidanaerobacter ...
Feature 1                                                                                     
NP_755889  75 GWVLLAMIQLPAVWLSLGILGKNFAILARRYNAVTLNDMLFARYq-sRLLVWLASLSLLVAFVGAMTVQFIGGARLLETA 153 Escherichia coli C...
NP_979864  78 GWVLLSAIQVVTGYIVLTVIGKKFAIIARKMEAITLIDYLKGRYn-nKAVVILSALCIIIFLFSATVAQWVGGGRLIESL 156 Bacillus cereus AT...
EFY05165   79 GWLYMAIVQVVVIFLVLGVFGKKIALIAREIDAVTVIDVLRARYh-sDFLANMAAVVIVAFFCATMVAQFVGAAKLFEAV 157 Phascolarctobacter...
EEX48363   87 AWVFLAMAQIPTGYYTLMVLGKKFAIVSRKTGANSISDFLRQRYe-sKAVLIIASLSIIFFLIAAIAAQLIGASRLLQGS 165 Jonquetella anthro...
EGL83834   77 SWALVTMTQVFMGVYILGILGKKFAIVARKINAVTLTDFLRERYk-sHAVVIGSALGIIIFIGAYMVAQFVGGARILEAI 155 Caldalkalibacillus...
EGF85689   82 GWVLLAVIQVVTGYFVLLVLAKKFKNAAQKINAITISDYLRNRYn-sKLVAFISTLAMIVFLIAAMSAQWVGGAKLLSAF 160 Gemella haemolysan...
EDM50258   82 AQAWIAAIQVPVTFLVLGVLGNKLALVSRRTGAVTVVGYFKARYk-sSALVIITSIGLIAFFIAQMISQFTGGATLIASI 160 Eubacterium ventri...
EFM22674   77 GWIYMAVIQTMTIFLVLGIFGTRVARLARRIHAVTIVDIIRHRYr-sDALAAVAAFVIVLFFAASMVAQFVGGAQLFAAV 155 Selenomonas sp. or...
EEG51842   84 VWTVCIYASVFMNFVILGIAGKKIGIIARRTNAVSYVSLLKNRYndnKGVTILGALAIIGFLIPYCSSQLVGGARLIETM 163 Clostridium aspara...
AEE91986   83 VFPFVVLSQSFMNFVVLGQIGKKLGIIARRIDAQSYQDILTYRYnnsKAVRWFSAIAIWIFYTSNVVAQLSGGSRLIEVM 162 Tepidanaerobacter ...
Feature 1                                                                                     
NP_755889 154 AGIPYETGLLIFGISIALYTAFGGFRASVLNDTMQGLVMLIGTVVLLIGVVHAa----GGLSNaVDTLQTIDPQLVTPQG 229 Escherichia coli C...
NP_979864 157 TGLSYTTALFLFTFSVLVYVLIGGFRAVALSDTLLGIIMLVGTTIILIATVVAg----GGIEKiMQELVQINPNLITPFG 232 Bacillus cereus AT...
EFY05165  158 TGFSYLTGLTMFGLIVVIYTTIGGFKGVAVTDACCAIAMIVGLCILMGGMMHTg----GGFNKiMSYISTQHPDMLEPLS 233 Phascolarctobacter...
EEX48363  166 TGLDYKSALLFFAVTVIVHTAVGGYRGVAFNGTLQGIVMTCSTVALFAAVVINg----GGIANiIQTMKAMNPNTISPFG 241 Jonquetella anthro...
EGL83834  156 TGLPYHVGLLIFGLTVVLYTAIGGFRAVAVTDAIQGIMMIVGGVLLWIMFMLKt----DGFSVlMSELAVKHPEMLTLPS 231 Caldalkalibacillus...
EGF85689  161 MGIEYKTGIVLISVIIIFCVVFGGLKNILITDMIQGLIMIFSTIILLFAVINYg----GGIDQiTANLVNINEKILTPFG 236 Gemella haemolysan...
EDM50258  161 TGLDHVTSLLIFGTVVVLYTAVGGFSAVVITDTIQGIVMCVGTFLFIFFVLKAg----GGLASiDAGLANNLPNVYNDIF 236 Eubacterium ventri...
EFM22674  156 TGYSYELGLVLFGIVVVIYTSIGGFRAVALTDTCCAIVMMLGIVLLFYYVLAAg----GGFTAiLEQLRTAHPAMLTPTA 231 Selenomonas sp. or...
EEG51842  164 IGIPYLWGLGIFALIILIYTIFGGIKGVSVSTVIQGFIMTFATLLLIFGVVSYirndsGSMAAaWQKLAASDHKMIMSPK 243 Clostridium aspara...
AEE91986  163 TGLPYVTALMIFGMVILIYTVTGGIKGVSTATVFQGIVMTLAIVMLFVMLLAKv----SPLEAtYRTIIDIDPNLVTPWV 238 Tepidanaerobacter ...
Feature 1                                                                                     
NP_755889 230 ad-diLSPAFMTSFWVLVCFGVIGLPHTAVRCISYKdsKAVHRGIIIGTIVVAILMFGMHLAGALGRAVIPDLtv----- 303 Escherichia coli C...
NP_979864 233 ad-gsLTKSYVTSFWILIGIGVVGLPQISVRAMSYKnsKAMHQALIIGTIVVGTIMIGMHLTGVFARVVLPGItv----- 306 Bacillus cereus AT...
EFY05165  234 rg--kMPISLYISQWLLVGICTLSLPQSVVRGISYKdtKALHNAMIIGTIVIGAMTLVATWIGVISKGILTGPitaygns 311 Phascolarctobacter...
EEX48363  242 aqegfMTVPWVSSFWVLVGFAVIGLPAVSQRAMSYKdtQSMHSAIVYGSVVSLLLLMGMHLVGAFGVTQVSGIsa----- 316 Jonquetella anthro...
EGL83834  232 ea--nITPLMLFSYFFLLGIACIGLPHASVRGMIYKdaDSMHRAIIYSGIIMGLFSIGFVTLGPVTKVLYPEMev----- 304 Caldalkalibacillus...
EGF85689  237 an-gsLTPSYVSSFWVLVGVGVIGIPQIAINSMLYKnkRSLKQSIIVGSIVIFIVMFGVHLIGVMARGVFPDIkd----- 310 Gemella haemolysan...
EDM50258  237 s---kYTPGGLLSFWILVGFGTLGLPQTAVRAMGFKntKSMHQAMWIGVLTCSFVIVGMHLAGTWAGAFVDVDnlp---t 310 Eubacterium ventri...
EFM22674  232 eg--rMPISLYVSQWLLVGALTIALPQSVVRGISYRssRDMHRAMIIGTVVIAFMNIAVNLVGVLGRGVLGVEakal-gg 308 Selenomonas sp. or...
EEG51842  244 q----WSIPVMFSYIWLVGITYVGLPHAVQGALTYKdtKSLHGAILVGVVFVTFWQGIMTFMGPAARLMNIVPev----- 314 Clostridium aspara...
AEE91986  239 -----WNPAYAFSMFVSLGLVTIGQPHGAMGCLMYKdtKGMHNAMIIGAVVVFIWSAMIVWAGNLARAVVPNLdv----- 308 Tepidanaerobacter ...
Feature 1                                #  ##                                                
NP_755889 304 pDLVIPTLMVKVLPPFAAGIFLAAPMAAIMSTINAQLLQSSATIIKDLYLnirp-----dqmqNETRLKRMSAVITLVLG 378 Escherichia coli C...
NP_979864 307 pDKVMPLLAMEVLPPWLAGVFLAAPMAAIMSTVNSLLLLVSSSIIKDIYVnyin------kdaTDSTIRKGSLWITAIVG 380 Bacillus cereus AT...
EFY05165  312 vDNIMPIAIVQSLTPFWAGVIIIGPIAATISTVSSLLLSSSSSIVKDVYMnikgk---reeqlSNNQIRLYSLGVTIILG 388 Phascolarctobacter...
EEX48363  317 gDLVVPTLIKNLFHPLIAGIVLAGPLAAAMSTVDSQLLVVVAAIVNDLLVnyirp----elktKAKTLRRLTFFTCSVVG 392 Jonquetella anthro...
EGL83834  305 aDMALPILILDIMPGWIAGLILAAPLAAIMSTVDSMLLVTSSSIVKDLYLnyin------pdaSDKKIAKLTYMTTLVIG 378 Caldalkalibacillus...
EGF85689  311 yDSVIPIITLKVLPWYLAALVLAAPMAAIITTVNAQFLLISSALIKDLLFnnkfi----kekiTSKKVPIFVYGVNILVI 386 Gemella haemolysan...
EDM50258  311 sDYFIPYIVQKIMPTGVAAIFLAAPMAAVMSTADSLLILATAAIVKDLWKnyvvkddpeknksYEKNVKSISTVITIILG 390 Eubacterium ventri...
EFM22674  309 vDSVIPQLMAHVMPPELLGFAIIGPLAASISTISGVLIVASSAVVKDVYLhhaqk---hgrdvPEERLRRLSMGVTAVLG 385 Selenomonas sp. or...
EEG51842  315 aDQTTPVIAMTVLPPWLAGVIIAGAVGAIQSTIAAMLIVISSSAVNDIYSnyvr------peaGPDQMKKMTQIITTLVL 388 Clostridium aspara...
AEE91986  309 pDYVIPYLSVNIMPGWMAGLTLAGVAAAIQSSIAAVIIVISSALVRDMYLtik-------ptkDPKKVKRITTIATIIAA 381 Tepidanaerobacter ...
Feature 1                                                                                     
NP_755889 379 ALLLLAaWKPPEMIIWLNLLAFGGLEAVFLWPLVLGLYWERANakGALSAMIVGGVLYAVLAKlniq-ylgFHPIVPSLL 457 Escherichia coli C...
NP_979864 381 LLVYAAaIKPPDFLIWLNLFSFGGLEAAFIWPIVLGLYWRKGNatGALASIVVGVGSYMCIHLfypn-pfgIHTVVFPIC 459 Bacillus cereus AT...
EFY05165  389 LLVYAIaIKPPSVIWQINMFAFGGLETAFFWVLIFGLFWPKANkyGAIAAMGGGVIIYCLAMVfkik-vldLHQIVLGIG 467 Phascolarctobacter...
EEX48363  393 LITIALaFNPPDLMVWLNLFATAGQLSTFLWPTILGLYWKGANaqGALASMVVGIGSYLVFNYyvpr-plaLHPIVPSLV 471 Jonquetella anthro...
EGL83834  379 VGVVLFsLTPPEYVQLIVLYAIGGLEATFFAPIVLGLYWKRATgwGAIASMYSGLISYLVIANwfpn-pfgMHTIVTALT 457 Caldalkalibacillus...
EGF85689  387 LLIMLLsMRPPSLIVNVNLFAFGGLEATFLWPILLGLYWKKAEkyGALSSIVVGLLSYILIKTvyv--ikfIEPVVISLL 464 Gemella haemolysan...
EDM50258  391 IVVMVLtINPPDIIFVLNMFAFGGLECTFFWPLVGGLFWKKGTkqAAVCSSVGAIATYIFATYfiniaglnAVVWGLLVG 470 Eubacterium ventri...
EFM22674  386 VIVFLLaVSPPSLIWLINMFAFGGLETAFFWVLVFGLFTRWANrtGALAAMAGGTVIYCAAMAlgik-plgLHPISVGIT 464 Selenomonas sp. or...
EEG51842  389 LAIFLFsIKPPAFLQMLINFAVGGMETIFFGPMLLGLFWKRANeqGALSGMIVGAVCYYLFSYplkamisgMQPVLPASL 468 Clostridium aspara...
AEE91986  382 LIPLIIaINPPAALQWFILFAIGGLTSSFFWPMLLGLYWWRTNeyGALAGMMGGMVTFILVQGniipfnlgMHGIVMGLI 461 Tepidanaerobacter ...
Feature 1                      
NP_755889 458 LSLLAFLVGNRFGTSVP 474 Escherichia coli CFT073
NP_979864 460 LAFIAYIIGSMSAVKKT 476 Bacillus cereus ATCC 10987
EFY05165  468 LSLLCFFIGNSFGKTAD 484 Phascolarctobacterium sp. YIT 12067
EEX48363  472 LSLIAFVIVSQTTKKPS 488 Jonquetella anthropi E3_33 E1
EGL83834  458 ISIVAMVIVSLATPKPS 474 Caldalkalibacillus thermarum TA2.A1
EGF85689  465 ISLVVFMMVSLIASKKQ 481 Gemella haemolysans M341
EDM50258  471 GILYFGIGMVTGRKGLD 487 Eubacterium ventriosum ATCC 27560
EFM22674  465 ASLILFLAGSYVGQHSE 481 Selenomonas sp. oral taxon 149 str. 67H29BP
EEG51842  469 IALAVMAAVSLATPKPP 485 Clostridium asparagiforme DSM 15981
AEE91986  462 VSGLLTVFVSLATPKPP 478 Tepidanaerobacter sp. Re1

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