2HQT,2HRK,2HSN


Conserved Protein Domain Family
GST_C_Arc1p_N_like

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cd10304: GST_C_Arc1p_N_like 
Click on image for an interactive view with Cn3D
Glutathione S-transferase C-terminal-like, alpha helical domain of the Aminoacyl tRNA synthetase cofactor 1 and similar proteins
Glutathione S-transferase (GST) C-terminal domain family, Aminoacyl tRNA synthetase cofactor 1 (Arc1p)-like subfamily; Arc1p, also called GU4 nucleic binding protein 1 (G4p1) or p42, is a tRNA-aminoacylation and nuclear-export cofactor. It contains a domain in the N-terminal region with similarity to the C-terminal alpha helical domain of GSTs. This domain mediates the association of the aminoacyl tRNA synthetases (aaRSs), MetRS and GluRS, in yeast to form a stable stoichiometric ternany complex. The GST_C-like domain of Arc1p is a protein-protein interaction domain containing two binding sites which enable it to bind the two aaRSs simultaneously and independently. The MetRS-Arc1p-GluRS complex selectively recruits and aminoacylates its cognate tRNAs without additional cofactors. Arc1p also plays a role in the transport of tRNA from the nucleus to the cytoplasm. It may also control the subcellular distribution of GluRS in the cytoplasm, nucleoplasm, and the mitochondrial matrix.
Statistics
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PSSM-Id: 198337
Aligned: 21 rows
Threshold Bit Score: 97.828
Created: 27-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
MetRS interfaceGluRS interface
Conserved site includes 17 residues -Click on image for an interactive view with Cn3D
Feature 1:MetRS interface [polypeptide binding site]
Evidence:
  • Comment:The MetRS interface with Arc1p corresponds to the same interacting surface used in classical GST dimerization.
  • Structure:2HSN; Interface between the N-terminal GST-fold domains of Saccharomyces cerevisiae MetRS and Arc1p; contacts at 4A.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        ## ### ###### ##                #  #     ##                                     
2HQT_A        24 KEQSAQAAQWESVLKSg-----------qIQPHLDQLNLVLRDNTFIVSTl-YPTSTDVHVFEVALPLIKDLVasskdvk 91  baker's yeast
2HSN_B        22 KEQSAQAAQWESVLKSg-----------qIQPHLDQLNLVLRDNTFIVSTl-YPTSTDVHVFEVALPLIKDLVasskdvk 89  baker's yeast
EDP55100      47 LEEQASIKQWLDTISGlqnalt-kddksvVMAILGQLNSHLASRTTLLGT--KPSVADIAAYALLAPLVEKWTpe---er 120 Aspergillus fum...
EFY86122      11 PTEEAEIQQWLTTSDRlks-------gedKATILETLNSHLASRTTLLGS--KPSKADVAIYETLSPIVAKWSpd---er 78  Metarhizium acr...
CBI25351      57 PKNSDEVSKWISFAESypvd------skaCFGALHVINEELAEKSVLMGDglKPSEADVIVFSLLHPFVIGLPn------ 124 wine grape
CBI53998      11 PAEEKEVQQWIQKADTika-------sddKQSVLNQLNQDLATRTTVLGT--KPSKADIAIYEAVAPLVKAWSpe---er 78  Sordaria macros...
EEQ91053      47 DAEQAEMVQWLVNTASateilakadtaalSEEFLTRLNKHLATRTTLLGT--KPSVADVAVYAIMAPMVEKWSae---er 121 Ajellomyces der...
NP_565938     49 SAQNNDVLKWLDFAEGfssd------skdWFSALEKLNLELATKSVLLGNglTPSAADVAVFSALHSSVLGLSd------ 116 thale cress
XP_001764218  55 EDVKSEVEKWLELADEvck-------atdVNAKLQELNAHLETRSVFAGRgmAITVADLSMFAAVHEILDEKKy------ 121 Physcomitrella ...
EFX05578      15 PAEETEIQKWTAAAAAvaaaa----epaaQSPVIAELNAHLASRTTVLGV--KPSKADVALYESLAPAVKAWTpe---qr 85  Grosmannia clav...
Feature 1                                          
2HQT_A        92 STYTTYRHILRWIDYMQNLlev----ssTDKLEI 121 baker's yeast
2HSN_B        90 STYTTYRHILRWIDYMQNLlev----ssTDKLEI 119 baker's yeast
EDP55100     121 TGEQGYHHIVRHVDFVQNSrlfalqipdEEKISI 154 Aspergillus fumigatus A1163
EFY86122      79 TGEKGHPHIVRHLDFVQNSalfglelkeDQKIQV 112 Metarhizium acridum CQMa 102
CBI25351     125 TERQKLPHLVRWMEYIQSKenf---gelFPKILL 155 wine grape
CBI53998      79 TGQQGRPNIVRLVDFVQNSplfg--lnvTDKIAI 110 Sordaria macrospora
EEQ91053     122 TGENGYHHIVRYIDFVQNAplfglkisaEEKIEI 155 Ajellomyces dermatitidis ER-3
NP_565938    117 SDKEKVPHVIRWVNYIQNKeel---stlFAPIPV 147 thale cress
XP_001764218 122 GDLEKVPHLLRWIDYIQGKqa------vYPQVPV 149 Physcomitrella patens subsp. patens
EFX05578      86 TGQAGHPHVVRLLDFVQSSplfglavadADRIAV 119 Grosmannia clavigera kw1407

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