Conserved Protein Domain Family
GST_C_GDAP1L1

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cd10302: GST_C_GDAP1L1 
C-terminal, alpha helical domain of Ganglioside-induced differentiation-associated protein 1-like 1
Glutathione S-transferase (GST) C-terminal domain family, Ganglioside-induced differentiation-associated protein 1-like 1 (GDAP1L1) subfamily; GDAP1L1 is a paralogue of GDAP1 with about 56% sequence identity and 70% similarity. It's function is unknown. Like GDAP1, it does not exhibit GST activity using standard substrates. GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains.
Statistics
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PSSM-Id: 198335
Aligned: 4 rows
Threshold Bit Score: 234.903
Created: 13-May-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative dimerputative
Feature 1:putative dimer interface [polypeptide binding site]
Evidence:
  • Comment:Based on dimer structures of other family members.
  • Comment:Residues from both N-terminal TRX-fold and C-terminal alpha helical domains form the dimer interface.
  • Citation:PMID 9680481

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         ##  ##  #                             #                                        
CAI23110     201 PQLSEPYLSKQKKLMAKILEHDDVSYLKKILGELAMVLDQIEAELEKRKLENegQKCELWLCGCAFTLADVLLGATLHRL 280 human
XP_687373    201 PQLTEPYLSKQKKLMAKILDHDNVNYLKKILGELAMVLDQVEAELEKRKLEYqgQKCELWLCGPTFTLADICLGATLHRL 280 zebrafish
NP_001072239 198 PQLMEPYLSKQKKLMAKILEHDNVNYLTKILIQLSMVLDQIEAELEKRKLEYegQKCELWLCGHIFTLADVLLGATLHRL 277 western clawed ...
XP_417379    104 PPLTEPYLSKQKKLMAKILEHDNVNYLKKILGELGMVLDQIEAELEKRKLEYqgQKCELWLCGCVFTLADILLGATLHRL 183 chicken
Feature 1                                       
CAI23110     281 KFLGLSKKYWEDGSRPNLQSFFERVQRRFAF 311 human
XP_687373    281 KFLGLSRKYWEDGSRPNLQSFFERVQKRYAF 311 zebrafish
NP_001072239 278 KFLGLSKKYWEDGSRPNLQLFFDRIQKRYAF 308 western clawed frog
XP_417379    184 KFLGLSKKYWEDGSRPNLQSFFDRIQKRFAF 214 chicken

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