Conserved Protein Domain Family
GST_C_CLIC5

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cd10297: GST_C_CLIC5 
C-terminal, alpha helical domain of Chloride Intracellular Channel 5
Glutathione S-transferase (GST) C-terminal domain family, Chloride Intracellular Channel (CLIC) 5 subfamily; CLICs are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes, and they may play roles in the maintenance of these intracellular membranes. The membrane localization domain is present in the N-terminal part of the protein. Structures of soluble CLICs reveal that they adopt a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. CLIC5 exists in two alternatively-spliced isoforms, CLIC5A or CLIC5B (also called p64). It is expressed at high levels in hair cell stereocilia and is associated with the actin cytoskeleton and ezrin. A recessive mutation in the CLIC5 gene in mice led to the lack of coordination and deafness, due to a defect in the basal region of the hair bundle causing stereocilia to degrade. CLIC5 is therefore essential for normal inner ear function. CLIC5 is also highly expressed in podocytes where it is colocalized with the ezrin/radixin/moesin (ERM) complex. It is essential for foot process integrity, and for podocyte morphology and function.
Statistics
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PSSM-Id: 198330
Aligned: 5 rows
Threshold Bit Score: 262.207
Created: 4-Apr-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
N-terminal
Feature 1:N-terminal domain interface [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                      ##
NP_058625    108 HRESNTAGIDIFSKFSAYIKNTKQQNNAALERGLTKALKKLDDYLNTPLPEEIDantcgedKGSRRKFLDGDELTLADCN 187 human
AAH56036     108 HRESNSAGIDVFSRFSAYIKNTKQQDNAALQKGLTKALKKLDDYLNTPLPEEIDansreeeRVSKRMFLDGDEFTLADCN 187 African clawed ...
ADK26736     250 HRESNTAGIDIFSKFSAYIKNTKQQDNAALERGLVKALKKLDDYLRTPLPEEIDadsteeeKVSKRKFLDGDDLTLADCN 329 Zonotrichia alb...
NP_998062    266 HRESNAAGNDIFAKFSAFIKNTKPDANEALEKGLTKALKKLDEYLNSPLPDEVDadsmeeeKASNRRFLDGNDLTLADCN 345 zebrafish
NP_001007386 104 NKESNTAGNDIFAKFSAYIKNTKPEANASLEKGLLKVLKKLDSFLNSPLPDEIDaestgeeKSSNRKYLDGNELTLADCN 183 zebrafish
Feature 1          #   #                               ##  ##    #            
NP_058625    188 LLPKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELAYADVAKRL 248 human
AAH56036     188 LLPKLHVVKIVAKKYRNYEISSDMSGIWRYLKNAYARDEFTNTCAADKETELAYADVAKRL 248 African clawed frog
ADK26736     330 LLPKLHVVKIVAKKYRNFEFPAEMTGLWRYLKNAYSRDEFTNTCAADKEIEQAYADVAKRL 390 Zonotrichia albicollis
NP_998062    346 LLPKLHIVKVVAKKYRNFDIPSDLTGVWRYLNSAYAQEEFTNTCAADNEIESAYLDVAKRL 406 zebrafish
NP_001007386 184 LLPKLHVVKVVSKKYRNFEIPSDLSGVWRYLQNAYSRDEFTNTCAADREIELAYQDVAKRL 244 zebrafish

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