2D2Z,2AHE


Conserved Protein Domain Family
GST_C_CLIC4

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cd10296: GST_C_CLIC4 
Click on image for an interactive view with Cn3D
C-terminal, alpha helical domain of Chloride Intracellular Channel 4
Glutathione S-transferase (GST) C-terminal domain family, Chloride Intracellular Channel (CLIC) 4 subfamily; CLICs are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes, and they may play roles in the maintenance of these intracellular membranes. The membrane localization domain is present in the N-terminal part of the protein. Structures of soluble CLICs reveal that they adopt a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. CLIC4, also known as p64H1, is expressed ubiquitously and its localization varies depending on the nature of the cells and tissues, from the plasma membrane to subcellular compartments including the nucleus, mitochondria, ER, and the trans-Golgi network, among others. In response to cellular stress such as DNA damage and senescence, cytoplasmic CLIC4 translocates to the nucleus, where it acts on the TGF-beta pathway. Studies on knockout mice suggest that CLIC4 also plays an important role in angiogenesis, specifically in network formation, capillary sprouting, and lumen formation. CLIC4 has been found to induce apoptosis in several cell types and to retard the growth of grafted tumors in vivo.
Statistics
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PSSM-Id: 198329
Aligned: 5 rows
Threshold Bit Score: 317.35
Created: 4-Apr-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
N-terminal
Conserved site includes 21 residues -Click on image for an interactive view with Cn3D
Feature 1:N-terminal domain interface [polypeptide binding site]
Evidence:
  • Structure:2AHE; Human CLIC4; contacts at 4A between N- and C-terminal domains.
  • Structure:2D2Z; Human CLIC4; contacts at 4A between N- and C-terminal domains.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         #                                                                #   ###  ##
2D2Z_A    111 HPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDensmedikfSTRKFLDGNEMTLADCN 190 human
2AHE_A    111 HPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDensmedikfSTRKFLDGNEMTLADCN 190 human
AAQ97761  110 HPESNTAGMDIFAKFSAFIKNSKPDANEALERGLLKTLQKLDEYLCSPLPDEIDhnsmeevkaSTRMFLDGEEMTLADCN 189 zebrafish
AAH76836  110 HPESNTAGMDIFAKFSAYIKNSRPENNEALERGLLKTLQKLDDYLNSPLPDEIDensldditqSNRKFLDGEEMTLADCN 189 African clawed frog
XP_417741 170 HPESYTAGMDIFAKFSAFIKNSRPEANEGLERGLLKTLQKLDEYLNSPLPDEIDensmeditvSTRKFLDGNEMTLADCN 249 chicken
Feature 1       ##  #                              ### ####   ##  ##       
2D2Z_A    191 LLPKLHIVKVVAKKYRNFDIPKEMTGIWRYLTNAYSRDEFTNTCPSDKEVEIAYSDVAKRL 251 human
2AHE_A    191 LLPKLHIVKVVAKKYRNFDIPKEMTGIWRYLTNAYSRDEFTNTCPSDKEVEIAYSDVAKRL 251 human
AAQ97761  190 LLPKLHIVKVVAKKYRGFEIPKDLTGIWRYLNNAYKREEFTNTCPSDKEIEIAYADVAKRL 250 zebrafish
AAH76836  190 LLPKLHIIKVVTKKYRGFEIPKSMTGIWRYLSNAYSKDEFTNTCPGDREIEMAYADVAKRL 250 African clawed frog
XP_417741 250 LLPKLHIVKVVAKKYRNFEIPKEMTGIWRYLSNAYSRDEFTNTCPGDKEIEIAYSDVAKRL 310 chicken

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