Conserved Protein Domain Family
GST_C_ValRS_N

?
cd10294: GST_C_ValRS_N 
Glutathione S-transferase C-terminal-like, alpha helical domain of vertebrate Valyl-tRNA synthetase
Glutathione S-transferase (GST) C-terminal domain family, Valyl-tRNA synthetase (ValRS) subfamily; This model characterizes the GST_C-like domain found in the N-terminal region of human ValRS and its homologs from other vertebrates such as frog and zebrafish. Aminoacyl-tRNA synthetases (aaRSs) comprise a family of enzymes that catalyze the coupling of amino acids with their matching tRNAs. This involves the formation of an aminoacyl adenylate using ATP, followed by the transfer of the activated amino acid to the 3'-adenosine moiety of the tRNA. AaRSs may also be involved in translational and transcriptional regulation, as well as in tRNA processing. They typically form large stable complexes with other proteins. ValRS forms a stable complex with Elongation Factor-1H (EF-1H), and together, they catalyze consecutive steps in protein biosynthesis, tRNA aminoacylation and its transfer to EF. The GST_C-like domain of ValRS from higher eukaryotes is likely involved in protein-protein interactions, to mediate the formation of the multi-aaRS complex that acts as a molecular hub to coordinate protein synthesis. ValRSs from prokaryotes and lower eukaryotes, such as fungi and plants, do not appear to contain this GST_C-like domain.
Statistics
?
PSSM-Id: 198327
Aligned: 5 rows
Threshold Bit Score: 201.99
Created: 1-Apr-2011
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
 
putative
Feature 1:putative protein interface 1
Evidence:
  • Comment:based on similarity to other aminoacyl-tRNA synthetase-like family members
  • Comment:Protein interface 1 is a surface used by GST-fold domains to bind other GST-fold domains in this subfamily, to facilitate complex formation.
  • Comment:Protein interface 1 corresponds to the same interacting surface used in classical GST dimerization.
  • Comment:Saccharomyces cerevisiae Arc1p uses this interacting surface to bind methionyl-tRNA synthetase.

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1              ### ####  # ##                            #  #                             
12644177       92 AAVLVQQWVSYADTELIPAACGATlpalgl-rssaqDPQAVLGALGRALSPLEEWLrlHTYLAGEAPTLADLAAVTALLL 170  human
AAH84762       79 SCALVKQWVSYAESELLPAVYGAErs---------qNNERSLLELQKILDNLDCYLklRTYLVGEIITLADIAVACCLIS 149  African clawe...
P49696         30 QQSQVWQWLSFADNELTPVSCAVVfplmgmtgldkkIQQNSRVELMRVLKVLDQALepRTFLVGESITLADMAVAMAVLL 109  torafugu
XP_003228107   83 AGALVRQWISFADLEVAPAACAAAfsvlgvskqnkqVTDRALAELRNLLGVLDSHLklRTYLVGEAVTLADVTVACALLL 162  green anole
AAM34663       80 QESQVWQWLSFAENELTPVACAVAfpllgimgvdkkLQQSSRAELLRVLKALDGTLalRTFLVGESVTLADAPVAMAALL 159  zebrafish
Feature 1                                                    
12644177      171 PFRYVLDppaRRIWNNVTRWFVTCVRQPEFRAVLGEVVLYSGA 213  human
AAH84762      150 PYTKVLSptrREKLLNVTRWFLTCVNQKQFKEILGEVNLLKTD 192  African clawed frog
P49696        110 PFKYVLEpsdRNVLMNVTRWFTTCINQPEFLKVLGKISLCEKM 152  torafugu
XP_003228107  163 PYKYVLDqalRSSYINVTRWFLTCINQPEFQAVLGPVKLCEQA 205  green anole
AAM34663      160 PFKYTLDpanRKSLVNVTRWFNTCVNQPQFLKVLGKISLCEKM 202  zebrafish

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap