2HSN


Conserved Protein Domain Family
GST_C_MetRS_N_fungi

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cd10290: GST_C_MetRS_N_fungi 
Click on image for an interactive view with Cn3D
Glutathione S-transferase C-terminal-like, alpha helical domain of Saccharomycetales Methionyl-tRNA synthetase
Glutathione S-transferase (GST) C-terminal domain family, Saccharomycetales Methionyl-tRNA synthetase (MetRS) subfamily; This model characterizes the GST_C-like domain found in the N-terminal region of Saccharomycetales MetRS. Aminoacyl-tRNA synthetases (aaRSs) comprise a family of enzymes that catalyze the coupling of amino acids with their matching tRNAs. This involves the formation of an aminoacyl adenylate using ATP, followed by the transfer of the activated amino acid to the 3'-adenosine moiety of the tRNA. AaRSs may also be involved in translational and transcriptional regulation, as well as in tRNA processing. MetRS is a class I aaRS, containing a Rossman fold catalytic core. It recognizes the initiator tRNA as well as the Met-tRNA for protein chain elongation. The GST_C-like domain of MetRS from Saccharomycetales is involved in protein-protein interactions, to mediate the formation of the the MetRS-Arc1p-GluRS ternary complex which is considered an evolutionary intermediate between prokaryotic aaRS and the multi-aaRS complex found in higher eukaryotes. AaRSs from prokaryotes, which are active as dimers, do not contain this GST_C-like domain.
Statistics
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PSSM-Id: 198323
Aligned: 8 rows
Threshold Bit Score: 109.072
Created: 18-May-2011
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
Arc1p interface
Conserved site includes 11 residues -Click on image for an interactive view with Cn3D
Feature 1:Arc1p interface [polypeptide binding site]
Evidence:
  • Comment:Arc1p is necessary in the formation of the MetRS-Arc1p-GluRS ternary complex in lower eukaryotes.
  • Comment:The MetRS interface with Arc1p corresponds to the same interacting surface used in classical GST dimerization.
  • Structure:2HSN; Interface between Saccharomyces cerevisiae MetRS and Arc1p; contacts at 4A.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        ##   #            #  #     #  ##  ##  #                                         
2HSN_A        62 NAILRYVMDd--------FEGQTSDKYQFALASLQNLLYHkelPQQHVEVLTNKAIENYLVELKE--PLTTTDLILFANV 131 baker's yeast
XP_002496763  61 NAILRYLLNd--------FAPQQVDEYEYALSSLEHLLHQkqvPKEHADECVDKALNNYLTSLEE--PLSATRLISFVNA 130 Zygosaccharomyc...
XP_002552176  62 NAILRYVLNd--------FEGLESSETHFAVSSLEAMLYHpsaPQEHVKENVSKALENYLQELRE--PFCATNLITFANA 131 Lachancea therm...
NP_986998     60 NAILRFVLNd--------YEASGSDECQYAQASLEHMLHRsemVPDYVTTAANKSLEHYLVSMEE--PLSATRLITFANT 129 Ashbya gossypii...
XP_451421     88 NAILRYVLNd--------FEEEESNEYNFAVSSLEAFASHkdpIKEHLAEAVQKSLDNYLTSVEE--PLSATRIVIFANT 157 Kluyveromyces l...
XP_446336     59 NAILRYALDd--------FEGIHSEQYHYALSSVEAYLYHqqsSEEHATELVNKMIDNYLKLDKDs-KLDAVTLISFANA 129 Candida glabrat...
XP_001643899  62 NAILRYAMDd--------FVGSQSKEYLDSLKKIESLFYGvdtLPIDQIDSLTATLASASDFVAE--PVDATKLIIFANA 131 Vanderwaltozyma...
EEQ46482      59 NAIVKYLAKdfttteaikFEEQVLYSAIKSNKKDELAKITd--LPKFAKEELTPSQIIVFASLYPafKDTKENEWFSKFS 136 Candida albican...
Feature 1                                  
2HSN_A       132 YALNSSLVHs-kFPELPSKVHNAVAL 156 baker's yeast
XP_002496763 131 YSLNPDAVKa-rFPQLPQGISKALAS 155 Zygosaccharomyces rouxii CBS 732
XP_002552176 132 YALSPESLEs-kFANLPASLSKALSA 156 Lachancea thermotolerans CBS 6340
NP_986998    130 YALDAKAVRa-rFAALPARVEQALEV 154 Ashbya gossypii ATCC 10895
XP_451421    158 YALDPAAVEa-rITSLPERLQEALKL 182 Kluyveromyces lactis NRRL Y-1140
XP_446336    130 YALRPTQINdafKDDLPEALKKAIQT 155 Candida glabrata CBS 138
XP_001643899 132 FALNQSHFN---GVTFPAKIAKAVES 154 Vanderwaltozyma polyspora DSM 70294
EEQ46482     137 QLPEVATGIknaLAITPVEREKETNT 162 Candida albicans WO-1

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