Conserved Protein Domain Family
Reelin_repeat_8_subrepeat_2

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cd10052: Reelin_repeat_8_subrepeat_2 
C-terminal subrepeat of tandem repeat unit 8 of reelin and related proteins
Reelin is an extracellular glycoprotein involved in neuronal development, specifically in the brain cortex. It contains 8 tandemly repeated units, each of which is composed of two highly similar subrepeats and a central EGF domain. This model characterizes the C-terminal subrepeat, which directly contacts the N-terminal subrepeat and the EGF domain in a compact arrangement. Consecutive reelin repeat units are packed together to form an overall rod-like molecular structure. Reelin repeats 5 and 6 are reported to interact with neuronal receptors, the apolipoprotein E receptor 2 (ApoER2) and the very-low-density lipoprotein receptor (VLDLR), triggering a signaling cascade upon binding and subsequent tyrosine phosphorylation of the cytoplasmic disabled-1 (Dab1).
Statistics
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PSSM-Id: 197360
Aligned: 7 rows
Threshold Bit Score: 264.35
Created: 25-Mar-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
reelin repeatreelinEGF domain
Feature 1:reelin repeat interface
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1           # #                                                             ## # #        
O93574       3015 PSYIKDNFESERvte---inWETIQGGVIGn-gCGQLAPYAHGDSLYFNGCQVRQAVTKPLDLTrASKIMFVLQIGSi-s 3089 chicken
BAC20286      143 PSSIKDNFESGWvse---esWSLVQGGGVGs-gCGQLSPHAHGDSLYFSGCRIRQAVTKALDLTrASKIMFVLQIGSv-s 217  zebrafish
XP_784287    1442 PTYFRYGVDRGLips--mdpWSKVNGGGEGh-gCGPLTPHAHGMALYFSGCGLRQTVTVELDTRlIVEIGFVLQIGSrdp 1518 purple urchin
XP_002120384 3130 VQDFKDSFEDSSfsipthlkWSLISGGSIGywrCGSLAPHGSGKSVHFDQCGKRILQTVEMNLMkKSYVQYVLQIGSl-n 3208 Ciona intesti...
NP_001131084 3269 PSYIKDNFESEKvte---inWENIQGGVIGn-gCGQLSPYAHGDSLYFNGCQIRQAITKPLDLTrASKIMFVLQIGSi-a 3343 western clawe...
P78509       3266 PSYIKDNFESARvte---anWETIQGGVIGs-gCGQLAPYAHGDSLYFNGCQIRQAATKPLDLTrASKIMFVLQIGSm-s 3340 human
XP_002597264 1900 SNYLKEGFETGTsi----tkWSHVRGGAIGl-gCGSLRPFGQGKSLYFNGCGVREVRSVELDTTkSSKIMFVLQIGSr-a 1973 Florida lancelet
Feature 1                                                       # ###                             
O93574       3090 QTDSCNTNLidPNTVDKAVLLQYSVNNGITWQVIaQHQPKDFIQAQRVSYNVPLEARMKGVLLRWWQPRHNGtGHDQWAL 3169 chicken
BAC20286      218 QTDSCNTALdqPDAVDRAVLLQYSVNNGVSWHVIaQHQPKDFIKAQRVSYNIPLEARVRGVQLRWWQPRHEGtGHDQWAL 297  zebrafish
XP_784287    1519 NNTACHINYssPTIRSKAVLLQYTLDNGIHWYLIqSHAPGDYSEPTRVLYDLPREARGLGVRFRWWQPRHDGvNQDQWAL 1598 purple urchin
XP_002120384 3209 PSSQCASNHsaPRPHGGAVLLQYSINNGITWDLLrEHVPSHYMRGRRVFVRLPTKSRTGHTVLRWWQPTHGGhGRNQWGV 3288 Ciona intesti...
NP_001131084 3344 QTDSCNTNLsdTNTVDKAVLLQYSVNNGITWQVIaQHQPKDFIQAQRVSYNIPLEARMKGVLLRWWQPRHNGiGHDQWAL 3423 western clawe...
P78509       3341 QTDSCNSDLsgPHAVDKAVLLQYSVNNGITWHVIaQHQPKDFTQAQRVSYNVPLEARMKGVLLRWWQPRHNGtGHDQWAL 3420 human
XP_002597264 1974 QTSTCNINLnsAQAPNKAVVLQYSTNNGIDWYLIkSHDPAEFMRPQRVSYNIPQPARTHATVFRWWQPEHDGkGHDQWAI 2053 Florida lancelet
Feature 1            #  
O93574       3170 DHVEVV 3175 chicken
BAC20286      298 DHVEVI 303  zebrafish
XP_784287    1599 DNVDLV 1604 purple urchin
XP_002120384 3289 DNVEVI 3294 Ciona intestinalis
NP_001131084 3424 DHVEVV 3429 western clawed frog
P78509       3421 DHVEVV 3426 human
XP_002597264 2054 DNVELV 2059 Florida lancelet

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