Conserved Protein Domain Family
Reelin_repeat_1_subrepeat_2

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cd10045: Reelin_repeat_1_subrepeat_2 
C-terminal subrepeat of tandem repeat unit 1 of reelin and related proteins
Reelin is an extracellular glycoprotein involved in neuronal development, specifically in the brain cortex. It contains 8 tandemly repeated units, each of which is composed of two highly similar subrepeats and a central EGF domain. This model characterizes the C-terminal subrepeat, which directly contacts the N-terminal subrepeat and the EGF domain in a compact arrangement. Consecutive reelin repeat units are packed together to form an overall rod-like molecular structure. Reelin repeats 5 and 6 are reported to interact with neuronal receptors, the apolipoprotein E receptor 2 (ApoER2) and the very-low-density lipoprotein receptor (VLDLR), triggering a signaling cascade upon binding and subsequent tyrosine phosphorylation of the cytoplasmic disabled-1 (Dab1).
Statistics
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PSSM-Id: 197353
Aligned: 7 rows
Threshold Bit Score: 271.675
Created: 25-Mar-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
reelin repeatreelinEGF domain
Feature 1:reelin repeat interface
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1           # #                                                         ## # #            
O93574        456 PMFISESFASSRlss--yhnFYSIRGAEVSFGCGVLASGKALVFNKDGRRQLITAFLDSSqSRFLQFTLRLGSKSv-LST 532  chicken
CAG08723      658 PAFLSEGFSSPRlss--yhsFSSLRGAEVSFGCGVLASGKALVFNRDSRRHLVTTPLDSSqARYLQFTLRLGSRSt-LSS 734  spotted green...
XP_001197662  303 PGNMTENFEMFTsdfdenekFSVIQGGSTGYGCGVLASSKALVFNQKGQRELITQEINTTnIRYLQFTVRIGSHGssSGT 382  purple urchin
XP_002120384  680 PQFLSENFNLGIwnh---tlFEPADGGEVGFHCGIISSGKALVFDGEGKRMLMTKPLNTTsLKYMQFTILLGRYSt-TGT 755  Ciona intesti...
NP_001131084  711 PVFISESFTSSRlss--yhnFYSIRGAEVSFGCGVLASGKALIFNKDGRRQLITAFLDSSqSRFLQFTLRIGSKSv-LST 787  western clawe...
P78509        708 PMFISESFGSSRlss--yhnFYSIRGAEVSFGCGVLASGKALVFNKDGRRQLITSFLDSSqSRFLQFTLRLGSKSv-LST 784  human
XP_002597264  637 NRRQEESFNGRHlhn--npnFLLSDGGVLGFGCGVLASGKAAVFSGEGRRQLVTADLDSTyAKFLQFTIRIGSNSv-LGS 713  Florida lancelet
Feature 1                                               # ###                                #  
O93574        533 CkaPDQPGEGVLLHYSYDNGITWKLLEHYSYLNYHEPRIISVELPEDARQIGIQFRWWQPYHssqgEDVWAIDEIVMT 610  chicken
CAG08723      735 CpaPDQPGEGVLLHYSSDNGITWTLLQHYAYQGFHEPRIVSVELPSGARKFGVQFRWWQPYHsgrgQDVWALDEISMT 812  spotted green p...
XP_001197662  383 CppALNASESVLVMSSCDNGIHWNLIKVLEYDAYKTARTVLIHLSPEAQNDACMIRWWQPSSggenQAVWALDDISMT 460  purple urchin
XP_002120384  756 CqpPSREGEGIVLQYSVDGGVLWKLLEHISPQNIGRRRIVSITLPEDARNHGVQFMWLQSEQps-nTAVWALDDILIT 832  Ciona intestinalis
NP_001131084  788 CkaPDKPGEGVLLHYSHDNGITWKLMEHYSYLSYHEPRIISVELPEDAKQFGIQFRWWQPYHsgqgEDVWAIDEIIMT 865  western clawed ...
P78509        785 CraPDQPGEGVLLHYSYDNGITWKLLEHYSYLSYHEPRIISVELPGDAKQFGIQFRWWQPYHssqrEDVWAIDEIIMT 862  human
XP_002597264  714 CrpPNRRQEGVLLHFSTDSGVTWQLLKELHFDEYKEPRIESLPLPSEAHHPHVRFRWWQPRHsganQDVWALDEVTMT 791  Florida lancelet

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