Conserved Protein Domain Family
Reelin_repeat_8_subrepeat_1

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cd10044: Reelin_repeat_8_subrepeat_1 
N-terminal subrepeat of tandem repeat unit 8 of reelin and related proteins
Reelin is an extracellular glycoprotein involved in neuronal development, specifically in the brain cortex. It contains 8 tandemly repeated units, each of which is composed of two highly similar subrepeats and a central EGF domain. This model characterizes the N-terminal subrepeat, which directly contacts the C-terminal subrepeat and the EGF domain in a compact arrangement. Consecutive reelin repeat units are packed together to form an overall rod-like molecular structure. Reelin repeats 5 and 6 are reported to interact with neuronal receptors, the apolipoprotein E receptor 2 (ApoER2) and the very-low-density lipoprotein receptor (VLDLR), triggering a signaling cascade upon binding and subsequent tyrosine phosphorylation of the cytoplasmic disabled-1 (Dab1).
Statistics
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PSSM-Id: 197352
Aligned: 6 rows
Threshold Bit Score: 294.438
Created: 25-Mar-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
reelin repeatreelinEGF domain
Feature 1:reelin repeat interface
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                            ##                           ## #   ####                     
NP_001131084 3058 PSQLVDTFDDEGtshdeHWSFYPNAVRTagfcgnPSFHLYWPNkkkdkTHNILSSRELIIQpGYMIQFKIVVGCdv---s 3134 western clawe...
O93574       2804 PSQLVDTFDDEGtsheeNWSSYPNAVRTagfcgnPSFHLYWPNkkkdkTHNILSSRELIIQpGYMMQFKIVVGCea---s 2880 chicken
P78509       3055 PSQLVDTFDDEGtsheeNWSFYPNAVRTagfcgnPSFHLYWPNkkkdkTHNALSSRELIIQpGYMMQFKIVVGCea---t 3131 human
XP_002120384 2917 FESNVLPVHNKGllsdeSFNFYPHGTRGdllcgsNPDSMTWNLnneisAEHSLTTRQLIVApGYMIQFKINVGCgsa-vn 2995 Ciona intesti...
XP_784287    1232 PSTLSESFEHGHqq-smIWEFYPYGQRQqevchqRTTALFWANerngaFDSAAITRQLIVDkNYMIQFKIVVGCqs--tp 1308 purple urchin
XP_002597264 1686 PSSLWETFEFHPnd--aLWEFWPNGAVSdetcgnVGGLMTWTNqqsdgTSNTITTMPLIVSeGYVLQFKIVVGCgmsded 1763 Florida lancelet
Feature 1                          ##                                                   ## #      
NP_001131084 3135 SCVDLHSVMLEYTKDarTDSWQLVQTQCLPsssnsVGCSPFlFHEASIYNsvnssVWKRVTLQLPdyvSSSATQFRWIQK 3214 western clawe...
O93574       2881 SCGDLHSVMLEYTKDarTDSWQLVQTHCLPsssnsIGCSPFqFHEATIYNsvnssMWRRITIQLPdhvSSSATQFRWIQK 2960 chicken
P78509       3132 SCGDLHSVMLEYTKDarSDSWQLVQTQCLPsssnsIGCSPFqFHEATIYNsvnssSWKRITIQLPdhvSSSATQFRWIQK 3211 human
XP_002120384 2996 ECSKEFHVRLEYKTNpmSTAWQLVREECFPttvsqPDCTLFsYNEASIYEpmpgnVWKRVTIPIDf-iEAETTQFRWYQR 3074 Ciona intesti...
XP_784287    1309 SCNLDYPIILEYTADphQDHWTVLKPACLPgdeedVRCDPFgYHDSSSYSengyhQWQTVTMELPrdtVSGSTQFRWIQQ 1388 purple urchin
XP_002597264 1764 SCASSLPVLLEFSTDpqYRHWEPVLSECLPandnsIDCIPYhYHGQSQFSaddfgAWTRVTIRLPdkvISSMTQFRWTQL 1843 Florida lancelet
Feature 1                            
NP_001131084 3215 GDEt-eKQSWAVDHVYIGE 3232 western clawed frog
O93574       2961 GEEl-eKQSWAIDHVYIGE 2978 chicken
P78509       3212 GEEt-eKQSWAIDHVYIGE 3229 human
XP_002120384 3075 TVSt-tHKPWALDDIYIGE 3092 Ciona intestinalis
XP_784287    1389 DASs-lAPSWAVDDVYIGE 1406 purple urchin
XP_002597264 1844 TSNlqvAPQWAIDDVYVGE 1862 Florida lancelet

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