3A7Q,2E26


Conserved Protein Domain Family
Reelin_repeat_6_subrepeat_1

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cd10042: Reelin_repeat_6_subrepeat_1 
Click on image for an interactive view with Cn3D
N-terminal subrepeat of tandem repeat unit 6 of reelin and related proteins
Reelin is an extracellular glycoprotein involved in neuronal development, specifically in the brain cortex. It contains 8 tandemly repeated units, each of which is composed of two highly similar subrepeats and a central EGF domain. This model characterizes the N-terminal subrepeat, which directly contacts the C-terminal subrepeat and the EGF domain in a compact arrangement. Consecutive reelin repeat units are packed together to form an overall rod-like molecular structure. Reelin repeats 5 and 6 are reported to interact with neuronal receptors, the apolipoprotein E receptor 2 (ApoER2) and the very-low-density lipoprotein receptor (VLDLR), triggering a signaling cascade upon binding and subsequent tyrosine phosphorylation of the cytoplasmic disabled-1 (Dab1).
Statistics
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PSSM-Id: 197350
Aligned: 6 rows
Threshold Bit Score: 294.506
Created: 19-Apr-2010
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 6 residues -Click on image for an interactive view with Cn3D
Feature 1:reelin receptor interface
Evidence:
  • Comment:Low-density lipoprotein receptor (LDLR) consists of 3 types of protein modules: LDLR class A (LA), epidermal growth factor (EGF) and YWTD beta-propeller; it recognizes reelin protein through its LA module.
  • Structure:3A7Q: Mouse reelin repeats 5 and 6 bind low-density lipoprotein receptor-related protein 8; contacts at 4.0A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                               #            ##                             #             
3A7Q_A        378 VLEDDFSTLDsrKWLLHPGGTKMpVCGSTGDALVFIEKaSTRYVVTTDIAVNeDSFLQIDFAASCSVTDSCYAIELEYSV 457  house mouse
2E26_A        378 VLEDDFSTLDsrKWLLHPGGTKMpVCGSTGDALVFIEKaSTRYVVTTDIAVNeDSFLQIDFAASCSVTDSCYAIELEYSV 457  house mouse
XP_784287     512 DDDQNFSLHDq-NWLISPGSTMGqVCGVAHNALHFASNeQMRYTITSDVMVTdHTFLQFDIALGCTAQETCYGILLEYSL 590  purple urchin
O93574       2071 VLEDDFTTLDsrKWLLHPGGTKMpVCGSTGDALVFIEKaSTRYVVTTDIVVNeDSFLQIDFAASCSVTGSCYAIELEYSV 2150 chicken
AAN76666      782 PLEDDFSSTDgrSWLLHPGGTRMpVCGSDGAAFAFIEKsNTRYGVTTDISLGpDAFIQFDFSASCSVTSSCYTVELEYSL 861  zebrafish
NP_001131084 2326 VIEDDFSSLDnkKWLLHPGGTKMsVCGSSGDALVFIEKaSTRYVVTTDIVVNeDSFLQIDFAASCSVTDSCYAIELEYSV 2405 western clawe...
Feature 1                                                                          # #         
3A7Q_A        458 DLGLSWHPLVRDCLPtNVECsrYHLQRILVSDTFNKWTRITLPLPsYTRSQATRFRWHQPAPFDkQQTWAIDNVYIG 534  house mouse
2E26_A        458 DLGLSWHPLVRDCLPtNVECsrYHLQRILVSDTFNKWTRITLPLPsYTRSQATRFRWHQPAPFDkQQTWAIDNVYIG 534  house mouse
XP_784287     591 DMGKTWDPLLTECFPsQVECtsYHMRSVYLADIYYGWNRVTLPLPhYTRSKSTRFRWSQPPRFDpGHEWALSNVYIG 667  purple urchin
O93574       2151 DLGITWHPILRDCLPtNVECnrYHLQRILISDTFNKWTRITLPLPpYTRSQATRFRWHQPAPFDkQQTWAIDNVYIG 2227 chicken
AAN76666      862 DLGLSWLPLVRDCLPaSADCssYTLQRLLVSDTYNKWGRVTLPIPhYARSSATRFRWFQPAPFDkQQTWALDNLYIG 938  zebrafish
NP_001131084 2406 DLGLSWNPVLKDCLPtNVECsnYQLQRALVSDTFNKWTRFTLPLPpYTRSQATRFRWNQPSPFDkQQTWAIDNVYIG 2482 western clawed frog

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