Conserved Protein Domain Family
Reelin_repeat_4_subrepeat_1

?
cd10040: Reelin_repeat_4_subrepeat_1 
N-terminal subrepeat of tandem repeat unit 4 of reelin and related proteins
Reelin is an extracellular glycoprotein involved in neuronal development, specifically in the brain cortex. It contains 8 tandemly repeated units, each of which is composed of two highly similar subrepeats and a central EGF domain. This model characterizes the N-terminal subrepeat, which directly contacts the C-terminal subrepeat and the EGF domain in a compact arrangement. Consecutive reelin repeat units are packed together to form an overall rod-like molecular structure. Reelin repeats 5 and 6 are reported to interact with neuronal receptors, the apolipoprotein E receptor 2 (ApoER2) and the very-low-density lipoprotein receptor (VLDLR), triggering a signaling cascade upon binding and subsequent tyrosine phosphorylation of the cytoplasmic disabled-1 (Dab1).
Statistics
?
PSSM-Id: 197348
Aligned: 5 rows
Threshold Bit Score: 321.859
Created: 25-Mar-2011
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
 
reelin repeatreelinEGF domain
Feature 1:reelin repeat interface
Evidence:

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                         ##                          ## #   ####                         
P78509       1605 GFQDKFDGSIDlqaNWYRIQGGQVDidclsMDTALIFTENi--gKPRYAETWDFHVSaSTFLQFEMSMGCSKPFSNSHSV 1682 human
AAN76666       62 GFYDTFDTAAPlrhNWYRVSGGELAedchtHTTVLNFNSEaldkRPRVAESWDFEVSgSSFLQFELSFGCSKSASASHGV 141  zebrafish
O93574       1354 GFQDKFDGTVDlqaSWYRIQGGQVDidclsMDTALMFSENi--eKPRYAETWDFHVSaSTFLQFELSMGCSKPYSNSHSI 1431 chicken
NP_001131084 1609 GFQDKFDGSVDlhaNWYRIQGGQVDvdclsMDTALLFNENi--gKPRYAETWDFHVMpSSSLQFNLNMGCSKQLSNSHVV 1686 western clawe...
XP_002597264 1231 GFYDNFSPMHHn--SWYMVQNAVVKat-cgSAVGLMFTSDr--dSPRYAETIDFHVTsSTFLQFDLVMGCGDVYTPTSQV 1305 Florida lancelet
Feature 1                 ##                                              ## #                    
P78509       1683 QLQYSLNnGKDWHLVTEECVPPtIGClHYTESSIYTSerFQNWKRITVYLPlstISPRTRFRWIQANYTvgADSWAIDNV 1762 human
AAN76666      142 QLEFSTDsGRRWSLVQTECVPPaIGCsAYTQRSVYSApqHLQWRRITVYLPsaaISPRTRFRWIQPHFApgADGWALDNV 221  zebrafish
O93574       1432 HLQYSLNnGRDWHLVTEECVPPtIGCqHYTESSIYTSerFQNWKRITAYLPpitNSPRTRFRWIQYNYAsgVDSWAIDNV 1511 chicken
NP_001131084 1687 QLQFSVNnGRDWQQVTEECIPPsIGClHYTESSVYSSerFQTSKRITVYLPsatVSPRTRFRWIQYNYGsgADAWAIDNV 1766 western clawe...
XP_002597264 1306 ELQYSLNmGRTWRLVWQACIPPaIGCdSYQVGSVYKSeaYNNWTRVTVYLPpaaSSPNTRFRWAQPQFNpsKDMWAIDNI 1385 Florida lancelet
Feature 1                     
P78509       1763 VLASGCPWMCSG 1774 human
AAN76666      222 LLTPGCPWMCSG 233  zebrafish
O93574       1512 VLATGCPWMCSG 1523 chicken
NP_001131084 1767 VLSSGCPWMCSG 1778 western clawed frog
XP_002597264 1386 YLGDGCPWMCSG 1397 Florida lancelet

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap