Conserved Protein Domain Family
Reelin_repeat_2_subrepeat_1

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cd10038: Reelin_repeat_2_subrepeat_1 
N-terminal subrepeat of tandem repeat unit 2 of reelin and related proteins
Reelin is an extracellular glycoprotein involved in neuronal development, specifically in the brain cortex. It contains 8 tandemly repeated units, each of which is composed of two highly similar subrepeats and a central EGF domain. This model characterizes the N-terminal subrepeat, which directly contacts the C-terminal subrepeat and the EGF domain in a compact arrangement. Consecutive reelin repeat units are packed together to form an overall rod-like molecular structure. Reelin repeats 5 and 6 are reported to interact with neuronal receptors, the apolipoprotein E receptor 2 (ApoER2) and the very-low-density lipoprotein receptor (VLDLR), triggering a signaling cascade upon binding and subsequent tyrosine phosphorylation of the cytoplasmic disabled-1 (Dab1).
Statistics
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PSSM-Id: 197346
Aligned: 5 rows
Threshold Bit Score: 314.934
Created: 25-Mar-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
reelin repeatreelinEGF domain
Feature 1:reelin repeat interface
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                          ##                         ## #   ####                         
O93574        615 NSISLDFTNLVEVtQSLGFYLGNVQPYCgHDWTLCFTGdskltSSMRYVETQSMQIGASYMIQFNLVMGCGqkfTPHMDN 694  chicken
NP_001131084  870 NSISLNFTNLVDVtQSLGFYLGNVQPYCeHDWTLCFTGdskqaSSPRYVETQSMQIGASYMIQFSLVMGCGeryTPHMDN 949  western clawe...
CAG08723      817 NTISLDFSNVLDVtQSLGFYLGHVQPYCqHDWTLSFSGepspgSIIRYVETQSMQIGASYSLQFSLVMGCGrepSPHIDT 896  spotted green...
P78509        867 NSISLDFTNLVEVtQSLGFYLGNVQPYCgHDWTLCFTGdsklaSSMRYVETQSMQIGASYMIQFSLVMGCGqkyTPHMDN 946  human
XP_001197662  465 NNINLDFSDHREVrRALTFHTGQIGEACnISPALILPGqs-hsSGASILETHSLQVGASYMIQFYLAVGCGqqrRLGHDY 543  purple urchin
Feature 1                   ##                                              ## #                  
O93574        695 QVKLEYSTNHGLTWHLVQEECLPsmpsCQEFTsaSIYHSNEFTQWRRITVLLPqktWSSATRFRWSQCYYTaPDEWALDN 774  chicken
NP_001131084  950 QVMLEYSTNHGLTWHLVQQECLPsmpsCQEFTssSIYHSSEFTHWRRITLPLPqktWSGATRFRWSQRYYTsDDEWALDN 1029 western clawe...
CAG08723      897 QVRLEFSTNHGLTWHLVKEACLPgmpsCSEFTapSVYHPSEFKNWRRITLSLPqktWSSATRFRWIQNYYGeQDEWALDD 976  spotted green...
P78509        947 QVKLEYSTNHGLTWHLVQEECLPsmpsCQEFTsaSIYHASEFTQWRRVIVLLPqktWSSATRFRWSQSYYTaQDEWALDS 1026 human
XP_001197662  544 SIKLEYSTDHGLTWHDVVPPCMPgdvgCTSYSqgSQYHSTEYTEWTRISLPLParlRFAVTRFRLRQSHHAdGATWAIRH 623  purple urchin
Feature 1                 
O93574        775 IYIGQQCP 782  chicken
NP_001131084 1030 IYIGQQCP 1037 western clawed frog
CAG08723      977 IYIGQQCP 984  spotted green pufferfish
P78509       1027 IYIGQQCP 1034 human
XP_001197662  624 LYVGEQCP 631  purple urchin

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