Conserved Protein Domain Family
LOTUS_1_Limkain_b1

?
cd09977: LOTUS_1_Limkain_b1 
The first LOTUS domain on Limkain b1(LKAP)
The first LOTUS domain on Limkain b1(LKAP): Limkain b1 is a novel human autoantigen, localized to a subset of ABCD3 and PXF marked peroxisomes. Limkain b1 may be a relatively common target of human autoantibodies reactive to cytoplasmic vesicle-like structures. The protein contains multiple copies of LOTUS domains and a conserved RNA recognition motif. The exact molecular function of LOTUS domain remains to be identified. Its occurrence in proteins associated with RNA metabolism suggests that it might be involved in RNA binding function. The presence of several basic residues and RNA fold recognition motifs support this hypothesis. The RNA binding function might be the first step of regulating mRNA translation or localization.
Statistics
?
PSSM-Id: 193591
Aligned: 4 rows
Threshold Bit Score: 128.852
Created: 17-Mar-2011
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q9Y4F3        875 LSLLSAETMSVLQDAPACCLPLFKFTDIYEKKFGHKLNVSDLYKLTDTVAIREQGNGRLVCL 936  human
NP_001119538  864 LSLLSFGTVSILQDAPACCLPLFKFTEIYEKKFGHKLIVSDLYRLTDTVTIRDQGNGRLVCL 925  western clawed frog
XP_414895     874 LSLLSSETVSILQDAPACCLPMFKFTEIYEKKFGRKLMVSDLYKLTDTVAIRDQGGGRLVCL 935  chicken
AAI39490      548 LTCLSSEIISILQDAPANCLPLYKFTETYERKFGHKLAVGDLYRLPELVCVREQGGGRLVCL 609  zebrafish
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap