Conserved Protein Domain Family
UP_II

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cd09967: UP_II 
Uroplakin II
Uroplakin II, the dimerization partner of uroplakin Ia, is a member of the uroplakin family. Uroplakins (UPs) are a family of proteins that associate with each other to form plaques on the apical surface of the urothelium, the pseudo-stratified epithelium lining the urinary tract from renal pelvis to the bladder outlet. UPs are classified into 3 types: UPIa and UPIb, UPII, and UPIIIa and IIIb. UPIs are tetraspanins that have four transmembrane domains seperating one large and one small extracellular domain while UPII and UPIIIs are single-pass transmembrane proteins. UPIa and UPIb form specific heterodimers with UPII and UPIII, respectively, which allows them to exit the endoplasmatic rediculum. UPII/UPIa and UPIIIs/UPIb form heterotetramers and six of these tetramers form the 16nm particle, seen in the hexagonal array of the asymmetric unit membrane, which is believed to form a urinary tract barrier. Uroplakins are also believed to play a role during urinary tract morphogenesis.
Statistics
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PSSM-Id: 197376
Aligned: 5 rows
Threshold Bit Score: 207.844
Created: 10-Mar-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
BAB84089      10 LPLILILLallspgaaDFNISSLSGLLSPALTeSLLVALPPChltggnat--lmvrrandSKVVTSSFVVPPCRGRRELV 87  human
Q95L04        10 LPLILILLavlapgasDFNISSLSGPLSPALTeSLLVALPPChltggnat--lmvrrandSKVVKSSFMVPPCRGRRELV 87  pig
P38575        10 LPLILILLavlapgtaDFNISSLSGLLSPALTeSLLIALPPChltggnat--lmvrrandSKVVKSDFVVPPCRGRRELV 87  house mouse
XP_002932941   4 LGIITVLLlis--gaiAQNVSQATGVLTPLAT-SAIFAFPDCtysgqtvslvitnststaTIIQNATFQVPQCRLKRDIV 80  western clawed ...
NP_001134402   8 FGILFTLSnae---fqVSLLKESDGVVTGRFAdSLLLSLPPCalatqsvtleynntdtneSKTLVNIFKVLPCRFRRDII 84  Atlantic salmon
BAB84089      88 SVVDSGAGFTVTRLsaYQVTNLVPGTKFYISYLVkkgtateSSREIPMSTLPRRNMesig-lgmARTGGMVVITVLLSVA 166 human
Q95L04        88 SVVDSGSGFTVTRLsaYQVTNLVPGTKYYISYLVtkgasteSSREIPMSTLPRKNMegig-lgmARTGGMVVITVLLSVA 166 pig
P38575        88 SVVDSGSGYTVTRLsaYQVTNLTPGTKYYISYRVqkgtsteSSPETPMSTLPRKNMesig-lgmARTGGMVVITVLLSVA 166 house mouse
XP_002932941  81 VINNGQSGNVQTVNvgYQIQNLQPGTNYMATYSSggi--sgPSFQFSTRTVYPAVAni-----mARSGGMVVITVLLSIA 153 western clawed ...
NP_001134402  85 STIENNAQFTTSRNlgYQVTNLTTGSTYRFQYVVga----eKSNILEVSTRQVKDHnqidsglpACSGAMMVTTVILSVS 160 Atlantic salmon
BAB84089     167 MFLLVLGFII 176 human
Q95L04       167 MFLLVVGFIT 176 pig
P38575       167 MFLLVVGLIV 176 house mouse
XP_002932941 154 MFVLLAGLIA 163 western clawed frog
NP_001134402 161 MFILLVALIF 170 Atlantic salmon
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