2PTK,1LKK,1SHB,1AD5


Conserved Protein Domain Family
SH2_Src_family

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cd09933: SH2_Src_family 
Click on image for an interactive view with Cn3D
Src homology 2 (SH2) domain found in the Src family of non-receptor tyrosine kinases
The Src family kinases are nonreceptor tyrosine kinases that have been implicated in pathways regulating proliferation, angiogenesis, invasion and metastasis, and bone metabolism. It is thought that transforming ability of Src is linked to its ability to activate key signaling molecules in these pathways, rather than through direct activity. As such blocking Src activation has been a target for drug companies. Src family members can be divided into 3 groups based on their expression pattern: 1) Src, Fyn, and Yes; 2) Blk, Fgr, Hck, Lck, and Lyn; and 3) Frk-related kinases Frk/Rak and Iyk/Bsk Of these, cellular c-Src is the best studied and most frequently implicated in oncogenesis. The c-Src contains five distinct regions: a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. Src exists in both active and inactive conformations. Negative regulation occurs through phosphorylation of Tyr, resulting in an intramolecular association between phosphorylated Tyr and the SH2 domain of SRC, which locks the protein in a closed conformation. Further stabilization of the inactive state occurs through interactions between the SH3 domain and a proline-rich stretch of residues within the kinase domain. Conversely, dephosphorylation of Tyr allows SRC to assume an open conformation. Full activity requires additional autophosphorylation of a Tyr residue within the catalytic domain. Loss of the negative-regulatory C-terminal segment has been shown to result in increased activity and transforming potential. Phosphorylation of the C-terminal Tyr residue by C-terminal Src kinase (Csk) and Csk homology kinase results in increased intramolecular interactions and consequent Src inactivation. Specific phosphatases, protein tyrosine phosphatase a (PTPa) and the SH-containing phosphatases SHP1/SHP2, have also been shown to take a part in Src activation. Src is also activated by direct binding of focal adhesion kinase (Fak) and Crk-associated substrate (Cas) to the SH2 domain. SRC activity can also be regulated by numerous receptor tyrosine kinases (RTKs), such as Her2, epidermal growth factor receptor (EGFR), fibroblast growth factor receptor, platelet-derived growth factor receptor (PDGFR), and vascular endothelial growth factor receptor (VEGFR). In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.
Statistics
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PSSM-Id: 199827
Aligned: 39 rows
Threshold Bit Score: 159.67
Created: 25-Feb-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 9 residues -Click on image for an interactive view with Cn3D
Feature 1:phosphotyrosine binding pocket [polypeptide binding site]
Evidence:
  • Structure:1LKK_A, Human tyrosine kinase P56-Lck SH2 domain binds phosphotyrosylpeptide Ac-pY-E-E-I, contacts at 4A
  • Comment:conserved Arg forms critical H-bonds with phosphate oxygens of pTyr side chain
  • Citation:PMID 8604142
  • Citation:PMID 9817027
  • Citation:PMID 8181064
  • Citation:PMID 7521735

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                   #                   # ###     #                  ###                 
2PTK_A        64 QAEEWYFGKitRRESERLLLNpeNPRGTFLVRESETTkGAYCLSVSDFDnak---glNVKHYKIRKLDSGGFYIts-rtQ 139 chicken
1LKK_A         2 EPEPWFFKNlsRKDAERQLLApgNTHGSFLIRESESTaGSFSLSVRDFDqnq---geVVKHYKIRNLDNGGFYIsp-riT 77  human
AAF64151     175 EAEEWFMPMlsRKDSERLLLLegNAQGVFLVRESETSqGSLTLSVRDEErglsgimnTVKHYRIKHPDYRYYYItt-kcS 253 Schistosoma man...
P00528       158 NSEDWFFENvlRKEADKLLLAeeNPRGTFLVRPSEHNpNGYSLSVKDWEdgr---gyHVKHYRIKPLDNGGYYIat-nqT 233 fruit fly
NP_001135850 147 QSEDWFFEKmtRKDAEKQLQLtsNSRGTFLVRGSETSpGAYSLSVLDHDdtr---gyNVKHYRIRTLDNGGYYIst-riT 222 purple urchin
NP_001191506 123 QTQDWWFEFd-RKESDKMLLLpgNPRGTFLVREATDK-STYVLSVRDNDkas--gepCVKHYRVRKMDDERGYFisakkT 198 California sea ...
EAT44003     146 NSEDWFFENvsRKEADKLLLAaeNPRGTFLVRPSEHNpNGFSLSVKDWEesr---gyHVKHYKIKPLDNGGYYIat-nqT 221 yellow fever mo...
NP_524934    158 NSEDWFFENvlRKEADKLLLAeeNPRGTFLVRPSEHNpNGYSLSVKDWEdgr---gyHVKHYRIKPLDNGGYYIat-nqT 233 fruit fly
AAS01047     179 QAEDWFFEKmtRKEAEKQLQLagNSRGTFLIRGSETSpGAYSLSVLDHDdar---gfNVKHYRIRTLDNDGYYIst-riT 254 Patiria miniata
NP_490866    134 ESEEWYAGKipRNRAERLVLSshLPKGTFLIREREADtREFALTIRDTDdqr--nggTVKHYKIKRLDHDQGYFittrrT 211 nematode
Feature 1                                 
2PTK_A       140 FSSLQQLVAYYSKHADGLCHRLTNV 164 chicken
1LKK_A        78 FPGLHELVRHYTNASDGLCTRLSRP 102 human
AAF64151     254 FSSLQELIQFYSIDSHGLCCKLTRA 278 Schistosoma mansoni
P00528       234 FPSLQALVMAYSKNALGLCHILSRP 258 fruit fly
NP_001135850 223 FKTLRDLVEHYQSQADGLVCRLMTA 247 purple urchin
NP_001191506 199 FKTLFDVIEHYKDNSDGLCCQLGAA 223 California sea hare
EAT44003     222 FPSLPALVLAYSKNALGLCHVLSSP 246 yellow fever mosquito
NP_524934    234 FPSLQALVMAYSKNALGLCHILSRP 258 fruit fly
AAS01047     255 FHTLHDLVNHYTSQADGLVCRLLNP 279 Patiria miniata
NP_490866    212 FRSLQELVRYYSDVPDGLCCQLTFP 236 nematode

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