Conserved Protein Domain Family
SH2_Jak_family

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cd09921: SH2_Jak_family 
Src homology 2 (SH2) domain in the Janus kinase (Jak) family
The Janus kinases (Jak) are a family of 4 non-receptor tyrosine kinases (Jak1, Jak2, Jak3, Tyk2) which respond to cytokine or growth factor receptor activation. To transduce cytokine signaling, a series of conformational changes occur in the receptor-Jak complex upon extracellular ligand binding. This results in trans-activation of the receptor-associated Jaks followed by phosphorylation of receptor tail tyrosine sites. The Signal Transducers and Activators of Transcription (STAT) are then recruited to the receptor tail, become phosphorylated and translocate to the nucleus to regulate transcription. Jaks have four domains: the pseudokinase domain, the catalytic tyrosine kinase domain, the FERM (band four-point-one, ezrin, radixin, and moesin) domain, and the SH2 (Src Homology-2) domain. The Jak kinases are regulated by several enzymatic and non-enzymatic mechanisms. First, the Jak kinase domain is regulated by phosphorylation of the activation loop which is associated with the catalytically competent kinase conformation and is distinct from the inactive kinase conformation. Second, the pseudokinase domain directly modulates Jak catalytic activity with the FERM domain maintaining an active state. Third, the suppressor of cytokine signaling (SOCS) family and tyrosine phosphatases directly regulate Jak activity. Dysregulation of Jak activity can manifest as either a reduction or an increase in kinase activity resulting in immunodeficiency, inflammatory diseases, hematological defects, autoimmune and myeloproliferative disorders, and susceptibility to infection. Altered Jak regulation occurs by many mechanisms, including: gene translocations, somatic or inherited point mutations, receptor mutations, and alterations in the activity of Jak regulators such as SOCS or phosphatases. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.
Statistics
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PSSM-Id: 198177
Aligned: 16 rows
Threshold Bit Score: 112.378
Created: 25-Feb-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
phosphotyrosinehydrophobic
Feature 1:phosphotyrosine binding pocket [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                #                    #                               # # 
P52332        426 DVAPPLIVHNIQNGCHGPIC---TEYAINKLrq-eGSEEGMYVLRWSCTDFDNILMTVTCFEksev--lggqKQFKNFQI 499  house mouse
2499669       386 EVAPPAVLENIHSNCHGPIS---MDFAISKLkk-aGNQTGLYVLRCSPKDFNKYFLTFAVERen-------vIEYKHCLI 454  Norway rat
2645987       360 EVAPPRLLEDMENQCHGPIS---SEFAVRKLka-aGSHPGLYVLRRSPQDFDSYLLTVCAETrs-------gQDYKRCLI 428  chicken
XP_003211194  391 DVAPPRLVMSILNGIHGPMQ---EEFVFAKLrq-eEHEEGLYVLRWSVLDFDRVILAVAKRDhqedpavpggLQFRQFRI 466  turkey
EDW82425      386 QYSTPSLKDLNETSFHGPIG---GIWSLRKLn---DYHCGSYIIRQCEQEYFTYYIDINVKRentld-thrrFETKIFKI 458  Drosophila wi...
EFX87846      305 ELVTPSLVKLRSLKCHGPVG---DSFAYDKLrakrQNKQGSYLLRESHVNYDELYLDVCLEDg---------QPSTTFSI 372  common water ...
EDW82068      421 LYKTPSLVELRELSCHGPIG---GAYSLMKLhe-kSDKCGSYIIRQCDLQYSTYYIDINVKClsgvh-knhrFQTETWKI 495  Drosophila wi...
EAT35265      332 HLSSPTLNRLTELKCHGPIG---GKYSYRKIte-kNSSVGANIVRQCENHYDTYYVDILERE----------NQMKTYKL 397  yellow fever ...
NP_001071749  382 DVCSPSLVEHLALNCHGPITcsfSEMIINQQa---DLQTGDCLLRRSQDSYDEYFINTVINTnp-------dVIVKNYKL 451  Ciona intesti...
EDW29771      444 SYRTPSLEELGNLCCHGPIG---GNYSLMKLhe-hGDKCGSYIVRQCDREYNTYYIDINTRItgrnt-dherCKTETLKI 518  Drosophila pe...
Feature 1                                          
P52332        500 EVQk------gRYSLHGSMDHFPSLRDLMNHLK 526  house mouse
2499669       455 TKNen-----gEYNLSGTKRNFSSLKDLLNCYQ 482  Norway rat
2645987       429 RRDed-----gSFWLAGLARRFCSLQELLGTYG 456  chicken
XP_003211194  467 QKKg------sSFVLEGWEREFPTVRALLDALQ 493  turkey
EDW82425      459 QRAepps-llwILHKDGQTSSHLTLKLLADSID 490  Drosophila willistoni
EFX87846      373 VKSve----gtWTFAGLECQPCSNVRELLALQG 401  common water flea
EDW82068      496 LRAekqerqwiLVQSNGVQTAFATLHDVALSIV 528  Drosophila willistoni
EAT35265      398 TYLenr---whVHRAPGEVTAYDELLDALRNLN 427  yellow fever mosquito
NP_001071749  452 DRVng----llGMFGDNASHRYQNLSALLNACR 480  Ciona intestinalis
EDW29771      519 LRKdg----qwVLCYHDGQHPFRDLLELAQFIP 547  Drosophila persimilis

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