3DPU


Conserved Protein Domain Family
RocCOR

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cd09914: RocCOR 
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Ras of complex proteins (Roc) C-terminal of Roc (COR) domain family
RocCOR (or Roco) protein family is characterized by a superdomain containing a Ras-like GTPase domain, called Roc (Ras of complex proteins), and a characteristic second domain called COR (C-terminal of Roc). A kinase domain and diverse regulatory domains are also often found in Roco proteins. Their functions are diverse; in Dictyostelium discoideum, which encodes 11 Roco proteins, they are involved in cell division, chemotaxis and development, while in human, where 4 Roco proteins (LRRK1, LRRK2, DAPK1, and MFHAS1) are encoded, these proteins are involved in epilepsy and cancer. Mutations in LRRK2 (leucine-rich repeat kinase 2) are known to cause familial Parkinson's disease.
Statistics
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PSSM-Id: 206741
Aligned: 11 rows
Threshold Bit Score: 227.989
Created: 11-Jun-2010
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
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Conserved site includes 11 residues -Click on image for an interactive view with Cn3D
Feature 1:GTP/Mg2+ binding site [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                  ####                                                                
3DPU_A      41 EIKVHLIGDGMAGKTSLLKQLIgetfd-----------------------------------------pkesqTHGLNVV 79   Chlorobaculum te...
YP_425925  432 DAKMLVLGNGRVGKTQVCRQLLgapfe-----------------------------------------enadsTHAIAVR 470  Rhodospirillum r...
AAM72753   452 EIKVHLIGDGMAGKTSLLKQLIgetfd-----------------------------------------pkesqTHGLNVV 490  Chlorobium tepid...
NP_484168  473 EAKLLLVGQGSVGKTSLIERLIhnkyd-----------------------------------------rnqpqTDGLKVE 511  Nostoc sp. PCC 7120
NP_617214  287 EAKLIVVGDGKVGKTCLAYRLIndefl-----------------------------------------edvqiTEGINIS 325  Methanosarcina a...
AAO83649   370 KVKLMFVGQEGVGKTSLCQALKgskkkkael----------------------------------qvtgdtvsTEGVKIQ 415  Dictyostelium di...
XP_647005  385 KVKLMFVGQEGVGKSSLCKALMgsrrrssssfa-----------------------------aelqksgdtisTEGVKIQ 435  Dictyostelium di...
AAU84033   130 EAKMILVGQGSVGKTSLVKRLLwdefn-----------------------------------------lheekTKGIEIE 168  uncultured archa...
CAG05593  1325 RMKLIVVGNVASGKTTLIQQLMklkrsq---------------------------------------lkskstSVGIDVQ 1365 Tetraodon nigrov...
BAC28700   173 RMKLMIVGNTGSGKTTLLQQLMkmkkpe---------------------------------------lgmqgaTVGIDVR 213  house mouse
AAO83650  1250 RMKLMLVGQENVGKTSIAKCLKkeiipvgkklrqtiglgtkksktptlteangsidfnapqsinplntslnisTDGINMD 1329 Dictyostelium di...
Feature 1                                 #                                                    
3DPU_A      80 TKqapnikglenddelkecLFHFWDFGGQEIMHaSHQFFMTRSSVYMLLLDSrt--------------dSNKHYWLRHIE 145  Chlorobaculum te...
YP_425925  471 SFkriap-------dgdtfRIQLWDFGGQDIYHgTHTLFMRSRGIYLIAWTPeqedndthtwngqtfrnHTLPYWLAQVA 543  Rhodospirillum r...
AAM72753   491 TKqapnikglenddelkecLFHFWDFGGQEIMHaSHQFFMTRSSVYMLLLDSrt--------------dSNKHYWLRHIE 556  Chlorobium tepid...
NP_484168  512 TWnvqvn--------skdiRLNVWDFGGQEIYHaTHQFFLTKRSLYLLVCNCrts-----------eeeNRIEYWLKLIE 572  Nostoc sp. PCC 7120
NP_617214  326 KWeipapy-----senrkiKLNIWDFGGQEIYHsTHQFFLTNRSVYLLVWNArit-----------kdyTNIYYWLHTLE 389  Methanosarcina a...
AAO83649   416 NIknk------------kvEFHAWDFGGQQVFYpTHQFFLTTHALYLVVFKLtdp-----------nfaERVNYWVRQVK 472  Dictyostelium di...
XP_647005  436 SIkgk------------kiDFYAWDFGGQQVFYpTHQFFLTNQALYLLVFKLtdp-----------nfaERVNYWTLQIK 492  Dictyostelium di...
AAU84033   169 EWqvtvd--------nqkiRLNVWDFGGQEIMHaTHQFFLTKRSLYLLVLDArlg-----------deeNRIEYWLKIIK 229  uncultured archa...
CAG05593  1366 DWtikdw-------drkkmVLNVWDFSGGEEFSgSHPHFLTSRALYLVVYNLsrga----------sqvDALKPWLFNIK 1428 Tetraodon nigrov...
BAC28700   214 DWsiqirg-----krrkdlVLNVWDFAGREEFYsTHPHFMTQRALYLAVYDLskgq----------aevDAMKPWLFNIK 278  house mouse
AAO83650  1330 DWrppsed------qsppvTFSIWDFAGQEVYYsTHQFFISSRSVFIVVFDMsvyn---------pdetSRVPYWLQCIE 1394 Dictyostelium di...
Feature 1                    ## #                                   ###                
3DPU_A     146 KYgg--ksPVIVVMNKIDen-------psYNIEQKKINERfpa--ienRFHRISCKNgd-gVESIAKSLKSA 205  Chlorobaculum tepidum
YP_425925  544 AFggh-qrPLMVVQTQADta-------hdRRPLSPAAREKaeaf-etwFELDYSAKTgr-rQASLMDTVADC 605  Rhodospirillum rubrum AT...
AAM72753   557 KYgg--ksPVIVVMNKIDen-------psYNIEQKKINERfpa--ienRFHRISCKNgd-gVESIAKSLKSA 616  Chlorobium tepidum TLS
NP_484168  573 SFgg--qsPVIIVGNKKDeq--------pLDINRKALREKypn---iqAIIETSCQDni-gIDELRTAILQQ 630  Nostoc sp. PCC 7120
NP_617214  390 AFge--dsPIILVMSKMNes--------dDDLNLKDLKSKflq---iaGYVKIDSKDgk-gISNLKEIICET 447  Methanosarcina acetivora...
AAO83649   473 SNssgavpAIFLVGTHSDvctpe-qlqeaESILKANFVKYsrv--kenTINFVCCATgk-gIKELKKRLIHE 540  Dictyostelium discoideum
XP_647005  493 ANsglsvpMIFLVGTHCDactpe-qlssaEQILKENFVKYsri--rqnAISFVSCTNgt-gIKELKKILTNE 560  Dictyostelium discoideum...
AAU84033   230 SFgg--dsPVIIVGNKIDeq--------pLDIDSRGLMAKygs---ikDIREVSCKAgd-gIDELKDAVTKE 287  uncultured archaeon GZfo...
CAG05593  1429 AAap--vsPVILVGTHTDvsnelqlqaclTKIREELLSHQsfp--airDYHMVSASEdsdaLTKLRKAIARE 1496 Tetraodon nigroviridis
BAC28700   279 ARas--ssPVILVGTHLDvsdekqrkaciSKITKELLNKRgfp--tirDYHFVNATEesdaLAKLRKTIINE 346  house mouse
AAO83650  1395 AFgg--nsPVILVGTHLDdlpn---gvdvNQITQDIHSKYftkfpnvkFFLPVSCKSgk-nINKLQNHIVKL 1460 Dictyostelium discoideum

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