1M1G


Conserved Protein Domain Family
NGN-insert_like

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cd09910: NGN-insert_like 
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NGN-insert domain found between N-terminal domain (D1) and C-terminal KOW domain (DIII) repeats of some N-Utilization Substance G (NusG) N-terminal (NGN)
This family contains a unique insert (domain II, DII) found between the highly conserved N-terminal domain (NGN, domain I, D1) and C-terminal Kyrpides Ouzounis and Woese domain (KOW, domain III, DIII) repeats of some N-Utilization Substance G (NusG) N-terminal (NGN) proteins in bacteria such as Aquifex aeolicus NusG (AaeNusG). NusG was originally discovered as having an N-dependent antitermination enhancing activity in Escherichia coli, and has since been shown to have a variety of functions such as being involved in RNA polymerase elongation and Rho-termination. Orthologs of NusG gene exist in bacteria, but their functions and requirements are diverse. The function of DII is as yet unknown, and belongs to Domains of Unknown Function 1312 (DUF1312).
Statistics
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PSSM-Id: 197364
Aligned: 27 rows
Threshold Bit Score: 85.7564
Created: 23-Feb-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1M1G_A       52 EKVVIRAq--GKEKYRLSlkgnaRDISVLGK-KGVTTFRIENGEVKVVESVE-GDTCVNAPPISk-------pGQKITCK 120 Aquifex aeolicus
ZP_08028184  68 WVGIVHR---GKVVQWFDsg-idGEYVVEGN-VGEVHVEVKDKKWHVREVDCpNQLCVKMGWADen------sIIPITCL 136 Solobacterium mo...
ZP_02035774  35 DFVYIYV---NDTLYEADplsedKLIEIDQGnGMVNHVQIKDGKVYMADSTCeNQDCVDQGTMTeenvdtrpmRNWIVCL 111 Bacteroides capi...
ZP_08029288  49 WIVVVYR---GEIVQWFDsg-vdATYTVKGN-VGDLTIEVKDGKWHVSKVDCpNHNCEKMGWVDvd------sILPIQCI 117 Solobacterium mo...
ZP_08012127  31 DVIEIYYh--NEVIEKIDis-idKTYTFDGD-YGKFSLEVKDKKYHAVNVECpNHDCEKVGWVSeg------sSRSIVCI 100 Coprobacillus sp...
ZP_03489452  31 SYASVYVk--EKQVLRIDls-kdKSYVVNGK-LGKVHIEVKQKKVRVTQEKSlHHYCSKQGFVSd-------aNVPIVCL 99  Eubacterium bifo...
ZP_02004480  29 NYALVWVa--NQSPKQINlq-qtKQISFQGA-MGESLIEVKKGRIRFIASPCqHKHCIHAGWLTn-------nGDFVVCL 97  Beggiatoa sp. PS
ABK42763     44 DRLEIYKe--NQLLQSLSln-qtTEIQVAGR-LGPVTIEIKPGAARLREFDSpRMIGTRSGWIRg-------gGEMAICL 112 Magnetococcus sp...
ZP_07833133  35 KEVVVSYk--DREILRKSls-lnDVYTVKGT-LGDVQVEVKDKRVRVEKENSpNHLCSIQGWVEd-------aNRPIVCL 103 Clostridium sp. ...
ZP_01551630  40 QYLKIESnyeDPVIFSLNq---sANKNISGF-LGSSVISINEGKARFVKSPCtKKYCIHHGWIDk-------vNQTIVCL 108 Methylophilales ...
1M1G_A      121 ENKTEAKIVLD 131 Aquifex aeolicus
ZP_08028184 137 PNDVFIGSANL 147 Solobacterium moorei F0204
ZP_02035774 112 PNGISIELRLA 122 Bacteroides capillosus ATCC 29799
ZP_08029288 118 PNGIYIVSANA 128 Solobacterium moorei F0204
ZP_08012127 101 PNDIYVIQAGT 111 Coprobacillus sp. 29_1
ZP_03489452 100 PNETVVKIEKE 110 Eubacterium biforme DSM 3989
ZP_02004480  98 PNQVSIGLYGT 108 Beggiatoa sp. PS
ABK42763    113 PCGLFIRIPAR 123 Magnetococcus sp. MC-1
ZP_07833133 104 PNNIVVQIEAG 114 Clostridium sp. HGF2
ZP_01551630 109 PNQITISIVGN 119 Methylophilales bacterium HTCC2181
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