Conserved Protein Domain Family
LIM1_Prickle_3

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cd09841: LIM1_Prickle_3 
The first LIM domain of Prickle 3
The first LIM domain of Prickle 3/LIM domain only 6 (LM06): Prickle contains three C-terminal LIM domains and a N-terminal PET domain. Prickles have been implicated in roles of regulating tissue polarity or planar cell polarity (PCP). PCP establishment requires the conserved Frizzled/Dishevelled PCP pathway. Prickle interacts with Dishevelled, thereby modulating Frizzled/Dishevelled activity and PCP signaling. Four forms of prickles have been identified: prickle 1-4. The best characterized is prickle 1 and prickle 2 which are differentially expressed. While prickle 1 is expressed in fetal heart and hematological malignancies, prickle 2 is found in fetal brain, adult cartilage, pancreatic islet, and some types of timorous cells. Mutations in prickle 1 have been linked to progressive myoclonus epilepsy. LIM domains are 50-60 amino acids in size and share two characteristic zinc finger motifs. The two zinc fingers contain eight conserved residues, mostly cysteines and histidines, which coordinately bond to two zinc atoms. LIM domains function as adaptors or scaffolds to support the assembly of multimeric protein complexes.
Statistics
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PSSM-Id: 188872
Aligned: 5 rows
Threshold Bit Score: 110.735
Created: 16-Jan-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Zn binding site
Feature 1:Zn binding site [ion binding site]
Evidence:
  • Comment: The two zinc fingers contain eight conserved residues, mostly cysteines and histidines, which coordinately bond to two zinc atoms. The Zn binding residues of LIM domain are highly conserved.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        #  #                      #  #  #  #                 #  #  
CAG03928     183 CQQCGRQICGGdmAVFASRAGPGACWHPQCFQCVSCSQLLVDLIYFHQDGQIYCGRHHA 241 spotted green pufferfish
Q80VL3       186 CEECGKQIGGGdiAVFASRAGLGACWHPQCFVCTTCQELLVDLIYFYHAGKVYCGRHHA 244 house mouse
XP_001507456 228 CEQCGKQIRGGdiAVFASRAGHGACWHPQCFVCSSCQELLVDLIYFYQGGKIYCGRHHA 286 platypus
AAI54996     179 CQQCGHQISVGdvAVFASRAGLGFCWHPQCFTCAQCLELLCDLIYFYQDGKVYCGRHHA 237 African clawed frog
CAQ15232     175 LFPCGRQICGGdiAVFASRAGHGSCWHPQCFQCASCNELLVDLIYFYQDGHIYCGRHHA 233 zebrafish

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