Conserved Protein Domain Family
PET_LIMPETin_LIM-9

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cd09830: PET_LIMPETin_LIM-9 
The PET domain of protein LIMPETin and LIM-9
The PET domain of protein LIMPETin and LIM-9: Members of this family contain an N-terminal PETdomain and five to six LIM domains at the C-terminus. Four of the six LIM domains are highly homologous to the four-and-half LIM (FHL) domain family while the other two show sequence similarity to LIM domains of the Testin family. Thus, proteins of this family may be the recombinant product of genes coding testin and FHL proteins. In Schistosoma mansoni, where LIMPETin was first identified, LIMPETin is down regulated in sexually mature adult Schistosoma females compared to sexually immature adult females and adult male. Thus, proteins of this family may be the recombinant product of genes coding Testin and FHL proteins. SmLIMPETin is down regulated in sexually mature adult Schistosoma females compared to sexually immature adult females and adult males. Its differential expression indicates that it is a transcription regulator. In C. elegans, LIM-9 binds to UNC-97 and UNC-96, components of sarcomeric muscle M-lines. LIM-9 also forms a complex with SCPL-1 and UNC-89, whose function is to organize sarcomeric A-bands, especially the M-line of muscle. Thus, it might play a role in regulating the assembly and maintenance of muscle A-band. The PET domain is a protein-protein interaction domain and is usually found in conjunction with LIM domain, which is also involved in protein-protein interactions. The PET containing proteins serve as adaptors or scaffolds to support the assembly of multimeric protein complexes.
Statistics
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PSSM-Id: 193605
Aligned: 13 rows
Threshold Bit Score: 119.347
Created: 30-Nov-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_002410817  60 EGYSWVPPGLSs-aKIEEYFSQLPNHKVPRlGTPGEKYRDRQLIVQLPKQDLA-----LAYCKFLe------rECQRSFE 127 black-legged tick
NP_001021410 192 HGYAWVPPGLSr-kKVEEYMSQLPNNVVPRtNSNGEKLREKQLLLQLPRQDLS-----VAYCRHLts-----qTERKVYE 260 nematode
Q16FI8        95 MGYTWVPPGILtsaKIQRYFDVIPSEKVPKiGTQGERFRDKQLVYQLPKQDLA-----LAFCKHVe------eTNRSSYE 163 yellow fever mo...
Q9VVB5       100 LGFTWVPPGVRassRINRYFEQLPDEMVPRlGSEGACSRERQISYQLPKQDLS-----LEHCKHLe------vQHEASFE 168 fruit fly
XP_001641741 100 EGYEWVPRGLTs-eEIQIYMSLLPEDKIPKlKSLGAQHRTKQLSLQIPLQDFS-----SKHCKKLt------lDQKMAMD 167 starlet sea ane...
XP_001188561  47 LGYSWVPQGLSv-tKIEDFMNSLPNNQIPRlHTPGEKYRDRQLIIQIPKQDVS-----EEFCHFLgd-----aATNESFT 115 purple urchin
XP_002731816  21 HGYSWVPAQLDs-eKIDKYMSSLPNSSIPKlHTPGETNRDKQMILQIPRQDLS-----LDFCTLMed----teDAVEQFT 90  Saccoglossus ko...
XP_002163384  96 EGYNWIPRGLKt-lQIESFMRKIPKSKVPKtDSEGARYRARQIFYQLPKQDYN-----RKYANFLk------eDAKPSFD 163 green hydra
EFA03661      81 LGYTFVPAGLTtarQVDQYYSSLPTHEVPKlGSKGEAARLQRIVKQLPKQDLA-----LAACKFVe------dSVKSSYQ 149 red flour beetle
EFX89211     136 QQYPQLPASSS---RIDDFMTSWPKDKVPKrNSQGDRWREHQLAFQLPRQDLA-----LAYCRYVe------pQNHTSYQ 201 common water flea
NP_730212     99 LGFTWVPPGVRassRINRYFEQLPDEMVPRlGSEGACSRERQISYQLPKQDLS-----LEHCKHLe------vQHEASFE 167 fruit fly
NP_001025228 155 HGYAWVPPGLSr-kKVEEYMSQLPNNVVPRtNSNGEKLREKQLLLQLPRQDLS-----VAYCRHLts-----qTERKVYE 223 Caenorhabditis ...
ACA13258      77 YGLNWLPIGVKq-tEVDLFLNSLPNEELPR-GEVADYIRRQRLRKQIPLQDCNpavtiEELWNHSkdsnpnleNELREAN 154 Schistosoma man...
XP_002410817 128 DFVNARNEIALDIGY 142 black-legged tick
NP_001021410 261 EFVNARNEIALDIGY 275 nematode
Q16FI8       164 DFVAARNEIALDIGY 178 yellow fever mosquito
Q9VVB5       169 DFVTARNEIALDIAY 183 fruit fly
XP_001641741 168 DFCEKRIKTALGVGA 182 starlet sea anemone
XP_001188561 116 QFLELRDETAFGIGK 130 purple urchin
XP_002731816  91 NFVEYRDAEAFGIGI 105 Saccoglossus kowalevskii
XP_002163384 164 ELSKFRLKSALGIGC 178 green hydra
EFA03661     150 DFISARNEIALDIGL 164 red flour beetle
EFX89211     202 DFVAARNDIALDIAY 216 common water flea
NP_730212    168 DFVTARNEIALDIAY 182 fruit fly
NP_001025228 224 EFVNARNEIALDIGY 238 Caenorhabditis elegans
ACA13258     155 RFKNFRNSHDLGIGL 169 Schistosoma mansoni
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