Conserved Protein Domain Family
Luminal_EIF2AK3

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cd09768: Luminal_EIF2AK3 
The Luminal domain, a dimerization domain, of the Serine/Threonine protein kinase, eukaryotic translation Initiation Factor 2-Alpha Kinase 3
The Luminal domain is a dimerization domain present in eukaryotic translation Initiation Factor 2-Alpha Kinase 3 (EIF2AK3), also called PKR-like Endoplasmic Reticulum Kinase (PERK). EIF2AK3 is a serine/threonine protein kinase (STK) and a type I transmembrane protein that is localized in the endoplasmic reticulum (ER). As a EIF2AK, it phosphorylates the alpha subunit of eIF-2, resulting in the downregulation of protein synthesis. eIF-2 phosphorylation is induced in response to cellular stresses including virus infection, heat shock, nutrient deficiency, and the accummulation of unfolded proteins, among others. There are four distinct kinases that phosphorylate eIF-2 and control protein synthesis: General Control Non-derepressible-2 (GCN2), protein kinase regulated by RNA (PKR), heme-regulated inhibitor kinase (HRI), and PERK. PERK contains a luminal domain bound with the chaperone BiP under unstressed conditions and a cytoplasmic catalytic kinase domain. In response to the accumulation of misfolded or unfolded proteins in the ER, PERK is activated through the release of BiP, allowing it to dimerize through its luminal domain and autophosphorylate. It functions as the central regulator of translational control during the Unfolded Protein Response (UPR) pathway. In addition to the eIF-2 alpha subunit, PERK also phosphorylates Nrf2, a leucine zipper transcription factor which regulates cellular redox status and promotes cell survival during the UPR.
Statistics
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PSSM-Id: 188874
Aligned: 10 rows
Threshold Bit Score: 360.175
Created: 5-Jan-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
homodimer
Feature 1:homodimer interface [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                         
Q9Z2B5        100 SLVIISTLDGRIAALDAeNDGKKQWDLDvgSGSLVSSSLSKPEVf----gNKMIIPSLDGDLFQWdr---------drES 166  house mouse
NP_001070617  100 ALVIISTLDGRIAALDPlNQGRKQWDLDvgSGCLVSSSLSKPEIf----gNKMFIPSLDGALFQWnr---------drES 166  zebrafish
EDO48785       53 SLIIVSTLDGKLSALDGnNNGDLKWSLPafSGPLLSSSLSSFQTg----nKVRVIPSLDGGLYRVa-----------gDT 117  starlet sea a...
EFR20021       70 GLVFVTTLDGKLSALDMlNGGTERWSIQtgPGPLLSSSIHRLELtnn-gkWVRMIPSLGGSLYKFd-----------gES 137  Anopheles dar...
Q9NIV1         73 RLLYISTLDGRLSALDIaKSGKLRWSVPtgPGPLISSSIHRLELtnn-gqFVRMIPSLSGGIYKFd-----------gDS 140  fruit fly
XP_420868      84 SLVIISTLDGRIAALDPeNSGRKQWDLDvgSGSLVSSSLSKPEVf----gNKMIIPSLDGDLFQWdr---------drES 150  chicken
EDV20817       98 SLIIVSTLDGKLTALDAkGNGQKHWILHslLGPLVSSSTTTVKRev---dAPKLIPSLDGHIYYQe-----------rGH 163  Trichoplax ad...
Q19192         54 NIIITATLDGVVTALDG-ETGEMIWRYE--DAPLLRGTLSTSDPidiggtSLQLMPTLDGRLFSYth---------ntNL 121  nematode
XP_002569659   33 GVLIANTVDGSFIGLDI-KSGKLVWKID--GPPLVSQSLSDLQLitk-tkSYSIVPSLDGQLFLMerkltgdsdllrgAS 108  Schistosoma m...
EDP31752       37 HYFLASTVDGKITAMDIeKSGEVVWIVDadNVPLLSSSLNQQKLvad-nfPYILVPSLDGSLYMF-------------NV 102  agent of lymp...
Feature 1                      #####    # #### ###           # ###                                
Q9Z2B5        167 MEAVPFTVESLLESSYKFGdDVVLVGGKSLITYGLSAYSGKLRYICSALGCRRWDSDEme-------------------- 226  house mouse
NP_001070617  167 MEAVSFSVESLLDSSYRIGeDTVLVGGKSLTTYGLGAYSGKLKYICSAVGCSRWGDEEge-------------------- 226  zebrafish
EDO48785      118 IESIPYTADSLLGSFHKLQdGSMLVGGKEAISCGIDPYTGKVRYICSAEGCKLSEDEEngh------------------- 178  starlet sea a...
EFR20021      138 IEPIPFSAEDMLKSSFKFSdDLVISGGKETRSYGVSLQTGRLVYVCTMHGCKNATELAmeasaqgkygppmrd------- 210  Anopheles dar...
Q9NIV1        141 IDPIPITAEHLLSSSAKFSdDLVISGGKETRSYGVSVRTGQLLYECSLNGCVNSTEEGlaiddtirepdeedqledgeql 220  fruit fly
XP_420868     151 MEAVPFTVESLLESSYKLGeDVVLVGGKSLTSYGLSSYSGKVKYICSAVGCRRWDDDEae-------------------- 210  chicken
EDV20817      164 VKLMPFTAEDMLSRSYKVSdKSVLSGSKHVHLYGINYVTGKIQYICTGEGCKSSGTEAv--------------------- 222  Trichoplax ad...
Q19192        122 IEPLPITTDSLLESTIRLG-QDAVAGGKSVTTKGFDLFTGEQKYECSMESCGPGDTETp--------------------- 179  nematode
XP_002569659  109 LKALPLSIDSLFSSNFMLTeDSLLTGGREHSTFTFNPNNGKIRYNCTRDGCTSSDVDKklvee----------------- 171  Schistosoma m...
EDP31752      103 KSSSLSLIPLSPNARILVG-NDEIAGGTFVTSTGINPLTGKMRYRCTAGKCMQYEATTnd-------------------- 161  agent of lymp...
Feature 1                             ##       # #              # ###                             
Q9Z2B5        227 ------------eeEDILLLQRTQKTVRAVGPRSGSEKWNFSVGHFELRYIpdmetragf-------------------- 274  house mouse
NP_001070617  227 -------------pEDVLLLQRTQKTVRAVRPRNGFEKWNFSVGNFELKFVpeiqsklnflegeapsgetwrevrreaqr 293  zebrafish
EDO48785      179 -----------vqnKDVLVVKRTQQTVRAVDQRTGSERWNFSVGQQDVNFLegi-------------------------- 221  starlet sea a...
EFR20021      211 dggpvdggtidsvpDDVIVVRRQTQTVRAVESRTGSERWNFSIGHHELERMgsedc------------------------ 266  Anopheles dar...
Q9NIV1        221 rdeagyivrhdpllDDVIIVRRQTQTVRAVESRTGVERWNFSVGQHELDLVrpsec------------------------ 276  fruit fly
XP_420868     211 -------------qEDTLLLRRTQKTVRAVGPRSGNEKWNFSVGHFELHYVpdvenragy-------------------- 257  chicken
EDV20817      223 -------------aDEILIVRREQEGLRAVDMVSGSERWNLTVGQYKLSLPn---------------------------- 261  Trichoplax ad...
Q19192        180 -------------kNPIILIRRTTNSIRAMDTLRGIERWNLSTAEIGVTLAg---------------------------- 218  nematode
XP_002569659  172 ---------plntnDPTIIVYRVNNVVRAVSAPSGIEKWNLSVHQYELCLLtggiptpttavqktsp------------i 230  Schistosoma m...
EDP31752      162 ------------ssLYTLIMRKNTQIARAADPLTGTEKWNLSVGEYDISLVssd-------------------------- 203  agent of lymp...
Feature 1                                                                                         
Q9Z2B5        275 -----iestfkpggNKEDSKIISDVEeqeat---mldtvIKVSVADWKVMAFSRk------GGRLEWEYQFCTPIASAWL 340  house mouse
NP_001070617  294 viqeetdaqtknhaKMHPNSAHTQVEgld--------lvIKVSVPDWKVMAFSTk-----pEGQLIWEHQFCTPIASAWL 360  zebrafish
EDO48785      222 ------------geEGDNKCAMPDAEvst-------ewdLRISIPDGLIAAVQPqasgdiaNEVVLWSHKFEAPIAAIWT 282  starlet sea a...
EFR20021      267 ---------rggreRQEINPMVLDLE-------------LRVIIPEGVICAVSKs-----aPGKIVWRHKFEVPIVSAWR 319  Anopheles dar...
Q9NIV1        277 ----------qlqpRDELELAVLDVD-------------IKVVVPEGIICAFSKs-----ePQTMLWKYKFDHPIVSAWN 328  fruit fly
XP_420868     258 -----iesnfklhvNKEETKIISDVDeqeam---mkdtvIKVSVADWKVMAFNRr------GGQLEWEYQFCTPIASAWL 323  chicken
EDV20817      262 --------------EDEEHHCDSDGRatpvsietndgekVYISFSKNKVYAFSGlg----sLSDLIWEKELEAPVATTWV 323  Trichoplax ad...
Q19192        219 --------------GITSPTLVSDVK-------------ILLQPPDGVIVAVDK-------YNREEWKTNVDGHIVSVWQ 264  nematode
XP_002569659  231 cnvplgtphthkkfVDESFVDMEEPD-------------WDIGLDKHTITARTKg-----lQSEEIWSYNFNSRISKAWI 292  Schistosoma m...
EDP31752      204 -----------hslHFERASVPAHIR-------------FLLEPPSGTISAVDN-------CGNLKWEKRLSSPIAKAWQ 252  agent of lymp...
Feature 1                                                                                         
Q9Z2B5        341 VR----DGKVIPISLFDDT-----------SYTASEEALGDEedivea------------------argatENSVYLGMY 387  house mouse
NP_001070617  361 VG----GGKVTPISLFDDT-----------SYNSQTETETQEdddime-----------------eargatESSVYLGMF 408  zebrafish
EDO48785      283 LH----GDYLKSVDLFSDEim-------pgLRDGLPNQDTAEa----------------------------KPIMYLGSH 323  starlet sea a...
EFR20021      320 SSadkrDGSLEVVDLFDRTd---------wLWNGNVDESNGEkthnd-------------------kpplvNPSLYIGMH 371  Anopheles dar...
Q9NIV1        329 TNa---DDELQPIDLFSSA-----------QWLWDQDENDTElpna----------------------pqsPPSIYLGMY 372  fruit fly
XP_420868     324 VK----DGKVIPISLFDDT-----------SYTTNNEVLEDEedlvea------------------argatESSVYLGMY 370  chicken
EDV20817      324 LS----NGKLRQIDMVLSGtgns----qgiDFSTSSSTDSNHkttal-------------------srvdnAIFMYIGTY 376  Trichoplax ad...
Q19192        265 VY----GNQIGEISIFDPSn----------IFTTQYEVMQREqhnl----------------------qtqSSLLYMGTS 308  nematode
XP_002569659  293 YRr--dLQNLRPLSLFMYDrvallliekvnEFKKATAISNLEslkekglnlfngkntlsssrkqkpdcpsrDRLIYLGSL 370  Schistosoma m...
EDP31752      253 LS----RGKIFEISLFSPEtig-----alsDFTENGHQFISKy----------------------------EAPFYFGTV 295  agent of lymp...
Feature 1                                           
Q9Z2B5        388 RGQLYLQSSvrvs-----ekfpTSPKALESVNGE 416  house mouse
NP_001070617  409 QGQLYLQSSvris-----ekfpSKSKALNGWGGD 437  zebrafish
EDO48785      324 EGQVYIQPShpii-----ntldPAIKIHSQTNDG 352  starlet sea anemone
EFR20021      372 EKQLYIQESdall-----qgsgENGQEIALLTDG 400  Anopheles darlingi
Q9NIV1        373 DKQLYIQESirlr-----qeimDQTKVYQQLTGD 401  fruit fly
XP_420868     371 RGQLYLQSSvris-----ekfpTSPKALESRNDN 399  chicken
EDV20817      377 NNQLYINPTidsctvnkmkaadTARKELLQMRDH 410  Trichoplax adhaerens
Q19192        309 NGFPFIIQSpk---------akNNLKQRMNALPE 333  nematode
XP_002569659  371 NGQLYVQTEdgvdlp--npemiNLSKSLSTNSAE 402  Schistosoma mansoni
EDP31752      296 NSVPYIIPSefmr-----elrrTSANIQTQYHPQ 324  agent of lymphatic filariasis

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