Conserved Protein Domain Family
Csx14_I-U
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cd09765: Csx14_I-U 
CRISPR/Cas system-associated protein Csx14
CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein containing C-terminal alpha-helical domain resembling Cas8a2, also known as GSU0052
Links
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Statistics
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PSSM-Id: 187734
Aligned: 3 rows
Threshold Bit Score: 422.431
Created: 13-Apr-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
REF_tigr:GSU0052  10 SIRVDPTNPGQFFACCGLLELADRLWDGAEGwfdkdGFLFSLRPYqekaqkcapATLLAEITRCRLTNTMSDSELKRRDQ 89  Geobacter s...
ZP_02732422        4 SVAVDPTNPGQFFACCGLLELADRLWPGAEGwfedgTFHVSTGDI---------ATLIDQLVCLRFVSSLGDDGLKRLGS 74  Gemmata obs...
YP_002298135       5 SIPVDLRNPGQVFACLGLMEAAEILGDPAEG-----GFFWKDREThvrftlttpGEADPVLTVLRFLTQAEVVALAPYHS 79  Rhodospiril...

REF_tigr:GSU0052  90 LMAVPKKIIESDpslEAEKKVLDKLWREAPLVLHSPFNIRVDWFLDEy-------------cGGTMFKTWAGQQSVFEIG 156 Geobacter s...
ZP_02732422       75 LLSADKSTLTELd--KQDKERLRKAWQVERVQIPAPFDFWLDWWWNDk-------------sGVTLLKTWAAKQFVLSMA 139 Gemmata obs...
YP_002298135      80 GIRDSHKIRTVEt-kNREFPCPLPAETALPIFLQADGVRVPISHWVDsfgkyniekrlfissGVDNVKFWAGNNSGAKIA 158 Rhodospiril...

REF_tigr:GSU0052 157 RGMKAALDSGDWSHTSPDDWLRRRMLNDSLPFNFDSELggvgSDLDVGFSFDPLKTIKv-QARPLLEFLAFVGLQRFRPM 235 Geobacter s...
ZP_02732422      140 NPMLSALKSLTWDSSSRENCLQRTAKLSGLPFYFDAANntqnTPRDNGFAPGAVKSAP--NDRPLLELLAFVGLQRFRPH 217 Gemmata obs...
YP_002298135     159 NLGLSIIKSVSDDIHSISAHPFAFAHPQSSSFRFDWRRd--yIPLDVGFSPNDHDKKVrmVGYPLVELLAAIGLQHARPL 236 Rhodospiril...

REF_tigr:GSU0052 236 KINaENRFQYFLWfGPLVSEVAAPAACGLFGPvr-lKAFEFRLLYRTK 282 Geobacter sulfurreducens PCA
ZP_02732422      218 RPDkAERILYATWsIPLPPSVASVAAAGMLNVtg-sRAFEFRMLYRTE 264 Gemmata obscuriglobus UQM 2246
YP_002298135     237 RLQ-NLAYRYGAW-GARVPTLFARAMLGLSNPgfpiRSFTMHLGWPGK 282 Rhodospirillum centenum SW
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