3V7F,3QHQ,3S5U


Conserved Protein Domain Family
Csn2

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cd09758: Csn2 
Click on image for an interactive view with Cn3D
CRISPR/Cas system-associated protein Csn2
Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.
Statistics
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PSSM-Id: 213408
Aligned: 11 rows
Threshold Bit Score: 307.35
Created: 23-Nov-2009
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 3 residues -Click on image for an interactive view with Cn3D
Feature 1:Ca binding site [ion binding site]
Evidence:
  • Structure:3V7F: Streptococcus pyogenes Csn2 binds calcium ion

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
3V7F_A         5 MNLNFSLLDEPIPLRGGTILVLEDVCVFSKIVQYCYQYEEDSELKFFDHKMKTIKESEIMLVTDILGFDVNSSTILKLIH 84  Streptococcus p...
3QHQ_A         2 VKINFPILDEPLVLSNATILTIEDVSVYSSLVKHFYQYDVDEHLKLFDDKQKSLKATELMLVTDILGYDVNSAPILKLIH 81  Streptococcus a...
Q03JI9         1 MNINFSLLDEPLEINQGTVLVIEDVSVFAQLVKEFYQYDEQSNLTIFDSKIRSIRSSELLLITDILGYDINTSQVLKLLH 80  Streptococcus t...
C7UDU4         1 MRVNFSLLEEPIEIEKATFLTIKDVQSFAHLVKLIYQYDGENELKLFDAQQKGLKPTELFVVTDILGYDVNSAATLKLIY 80  Enterococcus fa...
ZP_09735216    3 MKLNSHLLEAPIEINGCTQFVVEDVAAYAATVLACHRYGEESDLKLFNNDCKALKSSEVVTITDIFNYNINTSAILKQIH 82  Dolosigranulum ...
EFR89591       4 MNFNFKLLDEPIIIKDSTIFAIEDVRVFANVTKWLYQYDETEELTIFGAKQQPLKSSELMLITDVLGHDINSLATLKLIY 83  Listeria innocu...
ZP_07726268    1 MKINFPILDEPISLEHSTILSVESIEVFASLVREFYYYSDESRLKLFDGKLKSLKPSEFMIVTDILGYNLNSTAVLKLVY 80  Streptococcus d...
ZP_08549318    1 MKINFPLLDGMIEFDKTLILAIEDTETFSDLARLLYSYNESSPLKLALDDFSPLKESQLMLVSDILGYNVNTPAILKLVY 80  Lactobacillus a...
YP_006487070   1 MNLNFSLLEQPISFEKALIFVIEDVEVFSKVVHGVYQYGENSMLKFFNDKLQLLKPSELIVVTDILSFDSQAPTTLKLIY 80  Enterococcus hi...
ZP_07896664    2 LKINFTLLDQPIQIEDLTILVIEDVIIFSQIIRQVYQYELDGDFKIYNDRYESLKSSELVTITDIFGYDINSAGILKLIY 81  Enterococcus it...
3S5U_A         2 MRVNFSLLEEPIEIEKATFLTIKDVQSFAHLVKLIYQYDGENELKLFDAQQKGLKPTELFVVTDILGYDVNSAATLKLIY 81  Enterococcus fa...
Feature 1                                                 ##    #                                
3V7F_A        85 ADLESQFNEKpevkSMIDKLVATITELIVFECLENELDLEYDEITILELIKSLGVKVETQSDTIFEKCLEILQIFKYLTK 164 Streptococcus p...
3QHQ_A        82 GDLENQFNEKpevkSMVEKLAATITELIAFECLENELDLEYDEITILELIKALGVKIETQSDTIFEKCFEIIQVYHYLTK 161 Streptococcus a...
Q03JI9        81 TDIVSQLNDKpevrSEIDSLVSLITDIIMAECIENELDIEYDEITLLELIKALGVRIETKSCTVFEKIFDILQIFKYLVK 160 Streptococcus t...
C7UDU4        81 GDLEAQLNDKpevkSMIEKLTGTISQLIGYELLEHEMDLEEDGIIVQELFKALGIKIETTSDTIFEKVMEITQVHRYLSK 160 Enterococcus fa...
ZP_09735216   83 SEIEDQLNEKpavkTEIEQLTNQITELINAEVLNHELDLELDEITIQEVLIALGVKIEVDTDTLFEKVLEIFQVFKYLRN 162 Dolosigranulum ...
EFR89591      84 ADLEQQLNEKpevkSMIDKLTATISELIGYELLEHELDLEEDEITVIELFKALGIKIETKSDTVFEKLIEIVQVYKYLSK 163 Listeria innocu...
ZP_07726268   81 NDLEKQLNDNleakAEIENLLNRVTDLIGQECLESDLDLEYGSFELNSLFKLLGIKIEVACDTLFEKMFEILQVYQYLVK 160 Streptococcus d...
ZP_08549318   81 ADLERQFGEKeevkDRLESLAVEIANIISSECLENELDLEYDEITLLELIKAMGVKIETTMSSVYEKCYEIVQIFKYLSK 160 Lactobacillus a...
YP_006487070  81 ADLEQQLNENielkSRIDQLTTKVQEWISEELLEHELDLVCEEMSMVELFKALKIRITTQPESIFQKIMEILQIYKYLVK 160 Enterococcus hi...
ZP_07896664   82 ADLEDQLNQQpevkSMIDKLTSTITEIISYELIENEMDLEYDEITIQELFKSLGIKIEVKSDTIFDKVIEIIQVFKFLTK 161 Enterococcus it...
3S5U_A        82 GDLEAQLNDKpevkSMIEKLTGTISQLIGYELLEHEMDLEEDGIIVQELFKALGIKIETTSDTIFEKVMEITQVHRYLSK 161 Enterococcus fa...
Feature 1                                                                  
3V7F_A       165 KKLLIFVNSGAFLTKDEVASLQEYISLTNLTVLFLEPRELYDFPQYILDEDYFLITKN 222 Streptococcus pyogenes serotype M1
3QHQ_A       162 KNLLVFVNSGAYLTKDEVIKLCEYINLMQKSVLFLEPRRLYDLPQYVIDKDYFLIGEN 219 Streptococcus agalactiae ATCC 13813
Q03JI9       161 KRILVFVNSLSYFSKDEIYQILEYTKLSQADVLFLEPRQIEGIQQFILDKDYILMPYN 218 Streptococcus thermophilus LMD-9
C7UDU4       161 KKLLIFINACTYLTEDEVQQVVEYISLNNVDVLFLEQRVVQNRFQYILDENFYLSYEK 218 Enterococcus faecalis
ZP_09735216  163 KKLLILVNAASYFTTEELNEMAQFVSLLQMNVLMIEPKPTDANITQYILDSDFFLTVK 220 Dolosigranulum pigrum ATCC 51524
EFR89591     164 KKLLVFINVCAYLTEDELLELRRYVSLNQVKVLFVEPRKVEGFSQVILDSDYFLQVEK 221 Listeria innocua FSL S4-378
ZP_07726268  161 KKLLVFVNSLSYFKKSEIERLIEYIQLSNLRVLFIEPRKIEGFQQYVLDEDFCLLLDS 218 Streptococcus downei F0415
ZP_08549318  161 KKLLVFLNVGAYLTEKQIRSLLEYIGLCNLNVIFLEPSKLYDLPQYILDSDYYLEYLN 218 Lactobacillus animalis KCTC 3501
YP_006487070 161 KKCLVFINVGAYLTTTEMAELQEYISLCHMPVLFIEPGKIKGLKQTVLDQDYFLCEEM 218 Enterococcus hirae ATCC 9790
ZP_07896664  162 KKLLIFINVGTYLTKKEMKYLDEYVKLNHVKLLMIEGHRVEGMPQYILDSDYYLDLDL 219 Enterococcus italicus DSM 15952
3S5U_A       162 KKLLIFINACTYLTEDEVQQVVEYISLNNVDVLFLEQRVVQNRFQYILDENFYLSYEK 219 Enterococcus faecalis ATCC 4200

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