Conserved Protein Domain Family
Cas5_I-E
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cd09756: Cas5_I-E 
CRISPR/Cas system-associated RAMP superfamily protein Cas5
CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex
Links
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Statistics
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PSSM-Id: 187886
Aligned: 70 rows
Threshold Bit Score: 101.85
Created: 11-Jan-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Q46898         5 LILRLAGPmqAWGQPTFEgTRPTGRFPTRSGLLGLLGACLGiqrDDTSSLQALSESvqfavrcdelilddrrvsvtg--- 81  Escherichia col...
ZP_00129979    5 LTFQIYGPlqAYGTVAVGeIRPTSTMPTRSAVLGILAAAIGirrDEETRLAELRDGyrvavredapgkvmldyhtiqt-- 82  Desulfovibrio d...
Q314I4         5 LTFQIYGPlqAYGTVAVGeIRPTSTMPTRSAVLGILAAAIGirrDEETRLAELRDGyrvavredapgkvmldyhtiqt-- 82  Desulfovibrio d...
YP_001952710   4 LLFRLYGPlaSWGEIAVGeSRHSAVYPGKSALLGLIAAALGirrDEEQRQAALASGyrfavkvistghplrdyhtaqap- 82  Geobacter lovle...
Q12YA8         5 LIFRLYGPmaSWGDIAVGqHRPTYDHPSKSAIFGLIAAALGirrDEEERHLELSNAysygtlinsagkllrdyhtsqvps 84  Methanococcoide...
Q1R114         5 LVFRLYAPmaSWGEAAVGeARPTATYPGRGAILGLIGAALGirrDDDEGQLRLRQSlgiavkqrspgwllrdyhtvqvp- 83  Chromohalobacte...
Q3A5Z4         4 LVFRLYGPlaAWGEIAVGeSRHSAVYPSKSALLGLLAAALGirrDEEEQQAALAAGylfavkvlrtgsllrdyhttqvp- 82  Pelobacter carb...
YP_001530867   4 LLFRLYGPmaSWGEIAVGeTRHTANYPGRSAIIGLMAAALGikrSETENQQALDQGcliavearshgsllrdyhttqvp- 82  Desulfococcus o...
Q04QB7         5 LVFRLYGPlvSWGNIAVGeYRPSDSFPTKSAIIGLISASFGfdrSEDGKISELVKSvffatktlnpgnllrdyhtiqs-- 82  Leptospira borg...
Q2RY19         7 LVFRLVGPmaAWGDIAVGeRRGTWDVPAKSAILGLLAAGLGidrADRTAHEALDRGlgfavrqdrpgrllrdyhtaqa-- 84  Rhodospirillum ...

Q46898        82 ----lrdyhtvlgaredyrglksheTIQTWREYLCDASFTValw-ltpHATMVISELEKAVLKPRYTPYLGRRSCPLTHP 156 Escherichia col...
ZP_00129979   83 ---pgargkrqlhcrrdellltepnTILSRREYLMDALFTVclwqanhTVPYSLQEIARALRSPRWTIGLGRKSCPPALP 159 Desulfovibrio d...
Q314I4        83 ---pgargkrqlhcrrdellltepnTILSRREYLMDALFTVclwqanhTVPYSLQEIARALRSPRWTIGLGRKSCPPALP 159 Desulfovibrio d...
YP_001952710  83 --dsvgkfvyrtrrdelvlgkerlgTILSSREYRCDAFSLVavv-aedDAPYSLDEIREALMKPRFHLYLGRKSCPVAAP 159 Geobacter lovle...
Q12YA8        85 agtgrnrktfatrkdelavpkeelnTVLSTRDYYCDGVYTVilscktdTPPYSLELLGNSLKEPSFCLYLGRKSCPLALP 164 Methanococcoide...
Q1R114        84 --psqskvnyrsrreelsvpkdalnTILSSRDYRCDGLWVValr-lmpDAVWTLDELKSALERPRFTLYLGRKACPLAAP 160 Chromohalobacte...
Q3A5Z4        83 --dsagkvvyrtrreelirgkarlgTILSSREYRCDSMALVavr-anaNAPFTLETIREKLLKPAFLLYLGRKSCPLAAP 159 Pelobacter carb...
YP_001530867  83 --dsvggfvyrtrrdeliigkprlgTILSSREYRQDALAVSavr-vlpGARYELQTIKTHLEQPRLHVYLGRKSCPLSAP 159 Desulfococcus o...
Q04QB7        83 ---pgnvkrslltrkdelldseyveTILSSRDYRVDAVYDVals-ekkRAPYSLKEIRNALLSPIHTPYLGRKSCSIALP 158 Leptospira borg...
Q2RY19        85 ---pkarknarwstrrdelndddlnTVLSDRLYRTNAIATPaiwrrqgTEGPTLDQLTQALLRPRFTPYLGRKACPLGWP 161 Rhodospirillum ...

Q46898       157 LFlgtcqasdpqkalLNYEPVGGDIYSE 184 Escherichia coli K-12
ZP_00129979  160 FApkitdh-ttpqeaVAAYPADKLVSAG 186 Desulfovibrio desulfuricans G20
Q314I4       160 FApkitdh-ttpqeaVAAYPADKLVSAG 186 Desulfovibrio desulfuricans subsp. desulfuricans str. G20
YP_001952710 160 LNplvrda-vgfgdaLDSYPYGALFVSS 186 Geobacter lovleyi SZ
Q12YA8       165 INpkivsa-snikeaLQSVDPGEEGLVK 191 Methanococcoides burtonii DSM 6242
Q1R114       161 LTpaivea-dhwrgaLDHGFDSATDPER 187 Chromohalobacter salexigens DSM 3043
Q3A5Z4       160 LDpvvsdw-dsfgqaLDEAELKALMVEP 186 Pelobacter carbinolicus DSM 2380
YP_001530867 160 MNpqidktsrnfheaFQAYAHQPLLPVH 187 Desulfococcus oleovorans Hxd3
Q04QB7       159 MCpeilssdsfpnafEEYNKILMKKYES 186 Leptospira borgpetersenii serovar Hardjo-bovis JB197
Q2RY19       162 PRprllqadgllaafDAYDSAEWDAARQ 189 Rhodospirillum rubrum ATCC 11170
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