2ZOP


Conserved Protein Domain Family
Cmr5_III-B
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cd09749: Cmr5_III-B 
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CRISPR/Cas system-associated protein Cmr5
CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; signature gene for subtype III-B
Links
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Statistics
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PSSM-Id: 187880
Aligned: 18 rows
Threshold Bit Score: 95.8541
Created: 23-Nov-2009
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
2ZOP_A         4 RSQVWAQKAYEKVreaa---------------------kgegRGEYRDXALKLPVLVRQAGLSQALAFVDSRG--KEAhk 60  Thermus thermop...
Q1AZE1         7 LEQRRAAHALAAIqelqr-------------------agrggYGNYKSYVSSLPATILTNGLGQAAATLLAGA--KLNsk 65  Rubrobacter xyl...
ZP_01691096   10 LEQGRAAFAFACAqvakk-------------------dlgskAKEYKAYAKKMPMLIKTNGLGAALAFAFSKG--NKNgk 68  Microscilla mar...
ZP_03725246    5 LAQRRAAHALARVqareh-------------------agkstYGNYVAYVSALPATILTNGLGQAAATLLSRA--KGKmk 63  Opitutaceae bac...
ABV27232       9 LDQRRASHAWGAVqrakqkq---------------gphqkqePKKFGGQAKKLPVRIMTAGLGQALAFLKAKG--YAPg- 70  Candidatus Chlo...
YP_001341537   4 RNQIIAQTTYQQVaklees------------------gdkklHKSYATIVHKLPAMILQNGLPQATGFLLSKA--SEDah 63  Marinomonas sp....
ZP_01125568    5 LEQQRAADAWQCAeg--------------------------cTEPYTKLAKGLPALIMNSGLMQTLAFLEEKGrkERNgh 58  Nitrococcus mob...
YP_001391466   7 VNLQVAQFALEKVkevlnyyekeilkckeeereqiekkqkmlSSKYKTLSKKMTVLIQKNGLIGTLVFILSKV--KKEka 84  Clostridium bot...
YP_002509257  13 IENGRAKKAYEFVkdvk---------------------gdkfKEKYKSHVKKLAPLIKTNGLGNTIAFIYSND--EAYq- 68  Halothermothrix...
YP_001306890   3 RENKTKLIAKQLIvekts-------------------rndleLKSYKSLIKGLGAMIIQNGLYGTLVFLKAKG--ENKts 61  Thermosipho mel...

2ZOP_A        61 ----------aLGNDLAQVLGYrd--------------lRELAEAAREAellQYLRLTREVLAAAEWFKRFAQAL 111 Thermus thermophilus...
Q1AZE1        66 nrnadnrarekLYDHLSSWLCGgdees-------pyqkkGDLLENITRNdqdCYIRAQAEALEYLSWLKRFAEAF 133 Rubrobacter xylanoph...
ZP_01691096   69 pdts--kswglLYAHIEEWIRKdekqv-------lplgnEPLVKAIIHQdsaQYRAATIEVLAFLAWLRRFADGL 134 Microscilla marina A...
ZP_03725246   64 da------hhlLYDDLASWLCGddsvapy----pkhksnGRLMTAITTNteaDYLRAQAEALAYLVWLKKFANAF 128 Opitutaceae bacteriu...
ABV27232      71 -----------LLAELTDWINQrmppq--------gnepKDLLERIIEGnadVLRRATDEVLAYLLWLNRFAEAE 126 Candidatus Chloracid...
YP_001341537  64 ---------akLLDHLLSAFQKidkdfy------dvqdrRAFHEQIIASdlkKIMRYTREALEISGWLRRYVQGV 123 Marinomonas sp. MWYL1
ZP_01125568   59 h--------skLGEHLRCWLTRrfpqai------grsefAPFMQALLVAeprAFQQITAEALAWLRWVRQIAPAV 119 Nitrococcus mobilis ...
YP_001391466  85 n--------elVLQHIINWCEEdckldflrvdkentnpnEAFIENITKLsnqEYRLVTKEIMNLFGWIKRFTDGM 151 Clostridium botulinu...
YP_002509257  69 ----------kIYKQLEYWLKEekel----------inkDTLLEEVVSTdskNYRQLTKETLALLNWWRRFVDGM 123 Halothermothrix oren...
YP_001306890  62 kk-----hyhyVFEDIKHFLNEkgl-----------fsnNDILEYLERTe--NLSEIQERVLELVNWYRRYVEIF 118 Thermosipho melanesi...
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