Conserved Protein Domain Family
Csy3_I-F

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cd09737: Csy3_I-F 
CRISPR/Cas system-associated RAMP superfamily protein Csy3
CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; predicted Cas7 ortholog
Statistics
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PSSM-Id: 187868
Aligned: 23 rows
Threshold Bit Score: 403.199
Created: 23-Nov-2009
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q1CHZ2         8 TASVLAFERKLSNSDAMMyaGNWGQtdn---wqPIIIKEKAVRGT---ISNRLKnaLASDPAKLDAEI--QkaNLQRVDV 79  Yersinia pestis...
Q87GC8         3 LPNGLSYMKSIEASDVIFlvNWPDGrk-----tPLPYTSRVALGMkegSKSAYKydGQIDADVTAYSL--AqgNPHEIDF 75  Vibrio parahaem...
Q9CNW6         6 TPSVLAFERNLDISDAIF--AQKDSkndkdapvPLRIREKSVRGT---ISNRLKntITNDPAKLDAET--EkaNLQRVDV 78  Pasteurella mul...
Q5WRW0         7 IASVLAFEKKLVPSDGYMygCKWEHkdk---atPLRLNEKSVRGT---ISNRLKpaLQKDPAALNNEV--EkpNLQTVDT 78  Legionella pneu...
Q6F9L4         7 LPGSLSLQRGTVVSDGAFfnLFEDGkq-----ePLHVMYHGIRGTqnvAGNKEK--GAATGNSLAREV--T--NIQLTES 75  Acinetobacter s...
Q3J7J3         6 LPSLLNYTRSIVPSEGTFwvANADNr-------PLLIQDKTLLGTianYSSVYKkdKQRDEGAIEKEMmaGdnNIQRVDS 78  Nitrosococcus o...
Q1V9Z4         3 LCTQLNYVRSLSAGKAYFyyLSKSGem-----cPLEIDRTRLRAPkggYAEAYKgsKFVEKNVAPQDL--AysNPQFIEE 75  Vibrio alginoly...
YP_001555795   8 TPSVLAFEAKLLPSDALMfaGNWDEnv----wqPIIVGEKAVRGT---ISNRLKaaTANDPAKLDAEV--SkaNLQTVDI 78  Shewanella balt...
YP_942816      7 IASVLAFEKKLVPSDGYMygTNWDNktl---vtALSLIEKSVRGT---ISNRLKaaIKSDPVKLNTEV--EkaNLQTIDV 78  Psychromonas in...
YP_963569      7 VASVLAFEKKLVVSDGYMygTSWTErsq---ivPLALREKSVRGT---ISNRLKaaIKNDPAKLNAEV--EkaNLQRVDA 78  Shewanella sp. ...
Q1CHZ2        80 AALPFDTDTL--------KMSFTLRVLGNLATPSVCNDQEYQAELASVINGYISEQSFSVLAARYAENLANGRFLWRNRv 151 Yersinia pestis...
Q87GC8        76 CCVPYGAESI--------ECEFSVSFASSLRKPFKCSDPEVKRTLVQLIKLYEEKVGWEELANRFLENICNGRWLWRNNe 147 Vibrio parahaem...
Q9CNW6        79 ATLDDDKDTL--------VATFSIKVLPFTGRPNVCNDQDYQHQVMTTVAQYLSEQGMDELAKRYATNIANARWLWRNRm 150 Pasteurella mul...
Q5WRW0        79 CSLGSEEDTL--------KLYFTLKVLGGLKHPSACNNAAFKQSYQQAVSNYLETKGMRELAKRYALNIANARFLWRNRf 150 Legionella pneu...
Q6F9L4        76 AKLQPNAKLLvkwdfrfiDLSYVLFASASKAGADKTEEYNFRQAFLNFVNRAKESDGLKEVVRRYVRNIVNGRWLWRNRi 155 Acinetobacter s...
Q3J7J3        79 CHLPADADTF--------ELRFTLKFLANANGPEACEGAEFREDLESIAQAYAEKGGFTLLAERYLANLLNGRFLWRNRy 150 Nitrosococcus o...
Q1V9Z4        76 CYVKPGVDDI--------YCAFPLRIRANSLTPGICSDDEVRSKLSLLANTYKELNGYQELAHRYAKNILLGTWLWRNR- 146 Vibrio alginoly...
YP_001555795  79 AALPHHTDTL--------KLVFTLRILSDLHIPSTCNDPAYQEALAAKVKQYQIETQFSELAKRYAQNIANGRFLWRNRv 150 Shewanella balt...
YP_942816     79 CALAPEQDTL--------KLHFTLKILGGVQQPSACNNALFKQSYSKAVNKYIEKEGFKELGKRYALNLANARFLWRNRv 150 Psychromonas in...
YP_963569     79 CALAPEHDTL--------NLQFTIKVLGGITEPSACNNALFKQSYRAAAATYIENQGFTELARRYATNLANARFLWRNRv 150 Shewanella sp. ...
Q1CHZ2       152 GAEDiKVCIts-----qtKSYQf-DSNEFSLRQFs--qPSKELTALAQEIEQGLAgn-gFAFFTVDAFVRLGNGQ-EVFP 221 Yersinia pestis...
Q87GC8       148 CTYStSIGIkpwpwedekAISPf-HDIRKNYAGTnhfrDHKDWDNLIKLITDAFSqpngLCIFEVSATFRLGTNA-PIYP 225 Vibrio parahaem...
Q9CNW6       151 GAEKiKIEVtcg---entIHFD--DAKQFSLNHFd--hQDDKIHQIAKEIKQGLLge-kFVILYVTAYANMGYGQ-EVYP 221 Pasteurella mul...
Q5WRW0       151 GAENiQVEVmaln-egaeKSWNf-NALDFNPRDLe--tTTNEVDSLADRIADALAsendFLMLQITCYARIGKAQ-DVYP 225 Legionella pneu...
Q6F9L4       156 VAESiTIQVtaq---dypETFSf-DALSYNLKSFa--ePSEQEQKLAGILLKGITgestNAALHIEAIVDFGMGGvEVFP 229 Acinetobacter s...
Q3J7J3       151 GVQR-QITLrapynelkeKTFEiiDRAEPTLPQV----RMDELKPWIDHIASALSgktsFFLMEVSARVTIGLGQ-EVYP 224 Nitrosococcus o...
Q1V9Z4       147 ECRQlSIEVtts----dsQTLIveNATRLSWYGHwdeaSAECLEKLTAYLMRALSdpteYFYMDVKAKIGVGWGD-EVYP 221 Vibrio alginoly...
YP_001555795 151 GAQAvKIVVta-----nkQHFTf-DSYDFNLRDFa---DDQQINELAKIIQFGLMe--kHALIKVEAYSQLGQGQ-AVFP 218 Shewanella balt...
YP_942816    151 GSENiEVQVnaln-kdskQSWGf-DATQFSMRNFd--dANAQVLELGDRIAKALSseddFLMLEINCFVQLGKAQ-EVYP 225 Psychromonas in...
YP_963569    151 GAENiEVQVrakn-stldQSWTf-DAAQFSTKSFd--nNDAQINALANHIATVLSseddFLLLDINCFAQVGRAQ-EVYP 225 Shewanella sp. ...
Q1CHZ2       222 SQELVLDS---NSKKSKVLYQId--------------GIAALHSQKVGNALRTIDDWYPDaTela--lgPIAVEPYGSVT 282 Yersinia pestis...
Q87GC8       226 SQVFKDSV---KGEKNRIYQSTdvd----------geSSPILGCYKTGAAIATIDDWYPDaDk------PIRISHYGAHR 286 Vibrio parahaem...
Q9CNW6       222 SQELVLDNs-tNNRKSKILYEIn--------------QKAGMHSQKVGNAIRTIDTWYAEeVa-----fPIAAEPYGAVT 281 Pasteurella mul...
Q5WRW0       226 SEELVLDKg--KGKKSKILYAVd--------------GIAAMHSQKIGNALRTIDTWYPEfSdpvssagPIAIEPYGAVT 289 Legionella pneu...
Q6F9L4       230 SQNYLEDK---PKGFSRSLYQLtpkkpdhkandnqylGQAALRDQKIGNALRTIDTWYPSfKend--ekPIAIEPNGANL 304 Acinetobacter s...
Q3J7J3       225 SQEFVDKDsrgQGKKSKTLFFVqva----------dqQVAAMHSQKIGNAIRTIDNWYPDaNad----rPLAVDPFTVDK 290 Nitrosococcus o...
Q1V9Z4       222 SQEFLDDRe--DGAPTKQLATVell---------sgeETVAFHGQKVGAALQSIDDWWHEeAd-----kLLRVNEYGADR 285 Vibrio alginoly...
YP_001555795 219 SQELVMGGg--KGDKSKFLYQLd--------------GQAAMHSQKIGNALRTIDTWHPDfEei----gPIAVEPYGSVT 278 Shewanella balt...
YP_942816    226 SEELVLDKg--KGTKSKILYAVk--------------DIAAMHSQKIGNALRSIDTWYPEfVevektagPIAIEPYGAVT 289 Psychromonas in...
YP_963569    226 SEELVLDKg--KGEKSKILYNVn--------------GLAAMHSQKLGNALRTIDTWYPEfTdpetsagAIAIEPYGAVT 289 Shewanella sp. ...
Q1CHZ2       283 SRGKAYRQPK-QKMDFYTLLd-------nWVTKGTVPAVE----QQHYVMATLIRGGVFGE 331 Yersinia pestis Nepal516
Q87GC8       287 EDVYCYRHPN-TGKDLFTLLekadqyleqLQATDVLPDEMi--nDLHFIVANLIKGGLLQQ 344 Vibrio parahaemolyticus
Q9CNW6       282 TLGTAFRQPKtKKNDFYTLFd-------nWLLKGEVPPVE----QQHYVMSVLIRGGVFGA 331 Pasteurella multocida
Q5WRW0       290 NLGKAFRIPA-DKQDFYTFFd-------tWARGGELSRVE----DEHYMMAVLVRGGVFGE 338 Legionella pneumophila str. Lens
Q6F9L4       305 EGQIFYRVGK-DKVSAFDIL---------KEIDELDPSSE----KGMFLISCLIRGGVYSE 351 Acinetobacter sp. ADP1
Q3J7J3       291 RRARAVRLPDhGKSDFYSLLknl---palKDDIEHAPNAEaipgQAHYFMAVLIRGGVFSG 348 Nitrosococcus oceani ATCC 19707
Q1V9Z4       286 EYVIARRHVS-YGNDFYQLVrnt----enWIETMTASQSIp--nDVHFIMSVLNKGGLFNC 339 Vibrio alginolyticus 12G01
YP_001555795 279 NRGAAYRQPK-EKNDFYNLLd-------aWMLKDKIPSIE----QQHYVMAMLIRGGVFGE 327 Shewanella baltica OS195
YP_942816    290 NLGKAYRTPK-DKQDFYTFFd-------kWARGTELGRIE----DEHYVMAILVRGGVFGE 338 Psychromonas ingrahamii 37
YP_963569    290 NLGKAYRTPA-AKQDFYSFFd-------lWARGEKLSRIE----DEHYVMAVLVRGGVFGE 338 Shewanella sp. W3-18-1
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