Conserved Protein Domain Family
Csy2_I-F

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cd09736: Csy2_I-F 
CRISPR/Cas system-associated RAMP superfamily protein Csy2
CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; predicted Cas5 ortholog
Statistics
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PSSM-Id: 187867
Aligned: 25 rows
Threshold Bit Score: 240.294
Created: 23-Nov-2009
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q6D0W7         5 IILRRIQVENANAIAG--LTYGFPaITHFLGFT-HALSRKLQAShgl---tlEGCGVVSHQHQLhaygss--wersfALT 76  Pectobacterium ...
Q5WSN8         6 ILLPRIRVQNANALSSp-FTIGFPaMTGWLGGV-HALQRKLNTNsia--vmfSAVGVVVHRFDLqiykgpgdfvhsiVGT 81  Legionella pneu...
Q3J7J4         6 LLLPTLHVTGCNWESSh-LTRSLP-LTAMAGFAdYLVYFELADNaaeagadlKGFAVCLHDGQIh-----------eGLS 72  Nitrosococcus o...
Q6F9L5         5 AVIPRIRVQNANMQSNglLLGGVP-LFAANMFA-HHLARQLGTTd-------EGIIYIHHNQQRlggqa---ygrftPAQ 72  Acinetobacter s...
ZP_01074602    4 LILPHLKIHNANALSSp-FTIGFPaMTAWLGFS-HALERKLHDQgfka-ltfSSTAVISHDFDLqthkgegdfvssiIGT 80  Marinomonas sp....
YP_942815      8 LLLPHIKVHNANALSSp-FTIGFPaMTAWLGAV-HALQRKLNAKgyda-vkfISVGVVSHQCDLqthkgvgdyvhsiIGT 84  Psychromonas in...
YP_001209097  18 LLIKRLEVINANALSSp-LTYGFPaITAFTGAV-HALSRKINRSealadiflDGVLIAAHSCQPqtyreyfnkpftfIQS 95  Dichelobacter n...
YP_001052930   8 LLFDHVEIQAANTISSp-ITYGFPsLTGFTGAI-HALSRKLFPQqv----elGGVMIACHDYQIlgyknsdfsdltfNQT 81  Actinobacillus ...
YP_963570      9 LIIPHIKVHNANALSSp-FTIGFPaMTAWLGGV-HALQRHVNAQdip--vnfLATGVVSHDVNLqtykgdndyvhsiVGT 84  Shewanella sp. ...
ZP_01899599  438 IYLNSIRVESAQALSCp-YLIGTPsLTALGGFS-HKLQRNLQERlsad-vevECSAWFIRQYELskykps-pqinrfDRK 513 Moritella sp. PE36
Q6D0W7        77 RNPLTKEakt-----------aaFNEEGRMHMTVSLLIRCDGqipa-----------dttaLCEHLKQQAq-cQRLAGGT 133 Pectobacterium ...
Q5WSN8        82 GNPLEPKsekdkpk--gnavrpsFIEEPRCHLEVSLLVEYSGieaq-----------deqlMLERIYQLMlgnMKLAGGD 148 Legionella pneu...
Q3J7J4        73 KNPLALCkgnglsqarddllnppLLPEVKGSLSLSLVVALELedksa----------ldewLKNRATAFLq-tRRLAGGD 141 Nitrosococcus o...
Q6F9L5        73 RRGAVFIgkkdyss--knkyalsLQPTASCHLEFSLVIKFSSsr----------------iSPEKLTHILk-rSRFAGGQ 133 Acinetobacter s...
ZP_01074602   81 ANPLDKDgtr-----------saFIEEARCHLDVSLVIELEGdeeagi--------ydqqdVITQLQNIIa-rMKVASGD 140 Marinomonas sp....
YP_942815     85 GNPLDKTgsr-----------saFIEEARCHLDVSLIIEYTGtake-----------nedaVKDKITQLLnssMKMAGGD 142 Psychromonas in...
YP_001209097  96 RHPVEKTgdt-----------apIIQEGYCHLTVSLLIGVYAkdgyls-------eeqieaLKKQLFIAIq-qQPLAGGN 156 Dichelobacter n...
YP_001052930  82 RNPLKKNgds-----------psIIEEGKIHLDISLVVEMEVkdpelyyalnsqdseqktqFLEHCKKLLm-qQRIAGGS 149 Actinobacillus ...
YP_963570     85 GNPLDKTgar-----------saFIEEARCHLEISLVIEFNGitid-----------ehehLLSAVTQLLhakMKLAGGD 142 Shewanella sp. ...
ZP_01899599  514 KEVLIRDg---------------IIDDYLCNMTMDIVIKLNMkkdkfk-------dihgpnFINKLKGIIp--KRFAGGS 569 Moritella sp. PE36
Q6D0W7       134 Vidiervtvqslp-vdeaetrgvmrRLLPGFVLRDRTSLLHRHFQtlqqak-----------pqaemiDAWLDFAALKMQ 201 Pectobacterium ...
Q5WSN8       149 Ilnckepeil-------rdfqkakrKLMPGYALIERRDLMQAAMEqgq-----------------damDAMLDYVAVHYS 204 Legionella pneu...
Q3J7J4       142 Iigigqpkiys----krselaremgRLPPGWFIGNGAEFISNAPDpfa-----------------aliNATAWFPVEDKE 200 Nitrosococcus o...
Q6F9L5       134 Iiefleittha-----eneleaalkKIKTGFAILDRQDLLIEYQQrqqi----------------nrvQAFTQLLALKVD 192 Acinetobacter s...
ZP_01074602  141 LismqmpeiksidinddketaqvlrQLMPGYALIERRDLMADTMAqge-----------------dalDAMLSYLTVNHT 203 Marinomonas sp....
YP_942815    143 IltfnlpdffkieagntkdihklirKVMPGYALIERRDLMIEAMEqgq-----------------daiDAVLDNLAIHHT 205 Psychromonas in...
YP_001209097 157 Vigldaqepiqf---ykddvdqcvsELLPAFVLIDAHKELTAITQelqkdn-----------paatalDALIETASLHHI 222 Dichelobacter n...
YP_001052930 150 Vfqienvelfn-----lsdtkeiklALMPAFVLMDAKQTLADITQslqsgisnneitiypatpnanalDALLEVATLHHI 224 Actinobacillus ...
YP_963570    143 IksfqppfcinnsegddkdlrklqrHLMPGYVLIERRDLMQAAMAegv-----------------dalNALIDYLAVHHS 205 Shewanella sp. ...
ZP_01899599  570 Iyqp------------------fydTKINWLQVYSSESALFSVLSrlp------------------ksGCWVAPSSEPLT 613 Moritella sp. PE36
Q6D0W7       202 AERDPsdetvqwk------ylpkpgdgGFLTPLMIGYRAISPLyap---gevDKTRdphtpFCFAEAAYGIGEWQGAHRI 272 Pectobacterium ...
Q5WSN8       205 CTKEIvngqerviwqrkrkstglddqtGWIVPIATGFHGISELgt------aINQRdpdtpHLFAESVVTLGEFKMPYRL 278 Legionella pneu...
Q3J7J4       201 PQTTSahpspsk---------rrqhprHWLYATCVGYQLLESPqprrnrshgSSDTnsatnHAYAEPVHSLAELVWARKL 271 Nitrosococcus o...
Q6F9L5       193 TLRAFfnd----------------qnlSWISATNLGYALLEPLtdqr-agirQAQDqettaHAYAEPLTGIVQYFSLGEI 255 Acinetobacter s...
ZP_01074602  204 CEQLEdesivws---------sqrkvtGWIVPIATGFQGLSYPsk------aKNQRdpdvpHRFAESIITLGEFVMAHKI 268 Marinomonas sp....
YP_942815    206 ATTDEntkgestvt-----wsskrktkGWIVPIATGFHGLTELgq------aKNQRdpntlHRFAESVVTLGEFKMPHRI 274 Psychromonas in...
YP_001209097 223 PSDEQennweiy---------svkkgrGWLVPIPIGYQGISPQyda---gvmKNARnphypSQYVEALYSLGKWVFPYSI 290 Dichelobacter n...
YP_001052930 225 PLSEHatsqewet-------fnvnqgkGWLVPIPVGYQAISPLfta---gemQNCRvteypSQYVETVYSLGKWVFPFSL 294 Actinobacillus ...
YP_963570    206 CDQDEegniewrsy----rktlenkpaGWVVPIATGYHALSELsd------aKNQRdpntsHRFAESLVTLGEFKMPHRL 275 Shewanella sp. ...
ZP_01899599  614 SFNDMfeki---------------kinSKLKPVLIGYQAVEEPs--------SRLYslekyHCYAESLIGVAQFLNPITV 670 Moritella sp. PE36
Q6D0W7       273 s------------DISQILWEYDYqn-----gdYHCR 292 Pectobacterium atrosepticum
Q5WSN8       279 e------------SPDDLLWRYHVese---nnlYLCI 300 Legionella pneumophila str. Lens
Q3J7J4       272 lqpqddsttdnwlTENNLLWRWETdpps--rtvYLST 306 Nitrosococcus oceani ATCC 19707
Q6F9L5       256 lrknteveddswhNLQKLLWTYHWsqd----diFLLK 288 Acinetobacter sp. ADP1
ZP_01074602  269 r------------HLDDMLWHYYPdle---ndlYLCQ 290 Marinomonas sp. MED121
YP_942815    275 k------------SLNEILWSYHAdip---nnlYLCT 296 Psychromonas ingrahamii 37
YP_001209097 291 d------------LIDNAMWYQKYdae---kdlYLVT 312 Dichelobacter nodosus VCS1703A
YP_001052930 295 p-----------dDLSQCFWHYNTpqd----nlYLIT 316 Actinobacillus pleuropneumoniae L20
YP_963570    276 h------------SVEQMLWRYHIdg-----dlYLCQ 295 Shewanella sp. W3-18-1
ZP_01899599  671 rlng------qkrLFEDIFWQHYFesktmlmvkYQRK 701 Moritella sp. PE36
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