2I71


Conserved Protein Domain Family
Csx1_III-U

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cd09728: Csx1_III-U 
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CRISPR/Cas system-associated protein Csx1
CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as DxTHG family
Statistics
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PSSM-Id: 187859
Aligned: 19 rows
Threshold Bit Score: 217.65
Created: 23-Nov-2009
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2I71_B        23 ASIVFSTIGNPkgyqkvtYEIDGEKfe------------snVSVLALRDLlkv----dktVVILGISVADvync------ 80  Sulfolobus solf...
Q972U4         4 KILIVTFWSDInfsnekfFVFDEKGertsveq--eglnetlAEAEFLKDNndv-----kiVAFLPTTLSRilsdpppd-- 74  Sulfolobus toko...
O66700         2 KKVVIAPWGDPtnwqrvkYSYNDHEdk------------ypSATGIIIKAekp----dsvILVCPDSLAEkripykeiki 65  Aquifex aeolicus
Q59060         2 QKILIAPWGNFsswkkviYSFNGVEke------------skSSLSAIYDKinp----dkvYILVLDTLSNleseny---- 61  Methanocaldococ...
Q8U1S8         1 MRVLVTTWGNPfqwepitYEYRGIKvk------------srNTLPILVKTlep----eriLILVADTMANyydsgknkpe 64  Pyrococcus furi...
O57907         1 MRVLISPWGDFrkwkvakYTFSGKSle------------srSTLPIMVDVirp----qetIIIVPDTLSSdfssqe---- 60  Pyrococcus hori...
Q6L309        24 KSVLLALWGDPlgwkrvkYSMNNEKyl------------siTSSSVISRNkni----dksFIFIPDSIFPellnsv---- 83  Picrophilus tor...
Q97CI8         2 KSIFISLWGNPerwnvtrYSFNSKTce------------siTSSRVIYENfkt----dycIIYIPNSIYPgiykddty-- 63  Thermoplasma vo...
Q6L308         1 MIYIYQIIGVTkdyanvcFSIKKMDgfdqyinndmdgddmlASTFVFKKMpgd----kkiIFLWPASLDSgidn------ 70  Picrophilus tor...
YP_001178890   3 IIYQIGRLDNPgsa-kkeFFITRFKgeivnf-----sreseLSAFVLRDFlnsqgneaktVVIYPISILLnekikd---- 72  Caldicellulosir...
2I71_B        81 -------------------kyadYRSCKECIIQnsknd-------------lgisESYVVAPNVYQ----------KFKG 118 Sulfolobus solf...
Q972U4        75 ----------------ynqliqrLEAEVKNIVKv---------------------DYVHILPSEGTig------nhVHHE 111 Sulfolobus toko...
O66700        66 qcsgnl--sdktqgnlpfenyeeIKSKVENKIKdffskn----------infhkkPDVIISYSFGSyn------tlEFEG 127 Aquifex aeolicus
Q59060        62 -----------------gdivkeVKEKTENFIKenln---------------idnYEVIVCPGVGTfynkdfekyfKFYG 109 Methanocaldococ...
Q8U1S8        65 ieeksfssysevvedtkerilwhIKEEVIEELReedpelakk----ienmlkderITIEVLPGVGVfg------niTVEG 134 Pyrococcus furi...
O57907        61 ------------------smwnsVKDEVKEFTNqlg----------------vedVKIIVVPGSGSfs------ngSFFG 100 Pyrococcus hori...
Q6L309        84 -----------------dnlkdcFKSKLIDHIKnydtes----------adfinkSDVNIFPSMGSyykd---klyRYDV 133 Picrophilus tor...
Q97CI8        64 ----------------lsqyqdlINSKLCEFLNskdtes----------aefyknSNKIIFPSKGSftad--nknyIFDF 115 Thermoplasma vo...
Q6L308        71 -------------------fknrLKNNGLNEDN----------------------YEIIIMPSFGTyn------nkYYDF 103 Picrophilus tor...
YP_001178890  73 -----------------yvededLKKELKNICEnpsqylkspfdiinrlpleslrDDALVIHSLGTyln-----nvELDG 130 Caldicellulosir...
2I71_B       119 KPDHYFTYIY----YHSLRIlek--egiNEVFIDTTHGIN-YXGVLAKEAIQLAVSAYaak---sekEVKVSLYNSDPvg 188 Sulfolobus solf...
Q972U4       112 GLGNFHFLFY----LKLYEDllk--espDVVLLDLSRTFS-YYQNYAISATQLALDDYvitt--nrkNTILIQYARIDnt 182 Sulfolobus toko...
O66700       128 QAEDFFAGVLkglvYKFTEYlekgipekIEIILDVSHGIN-YTTVMTYEAVRTLAQLLay-----ftEVSLKVLNADPvi 201 Aquifex aeolicus
Q59060       110 NLTDYYSFAL----YELSKRld----gdLEVHLDLTHGLN-YMPVLTYRVIKDLLEILai-----knKVRLVVYNSDPyv 175 Methanocaldococ...
Q8U1S8       135 EMLDFYYYAT----YKLAEWlpv--qnnLEVYLDLTHGIN-FMPTFTYRALRNLLGLLay-----lyNVKFEIVNSEPyp 202 Pyrococcus furi...
O57907       101 NPMDAYMFLL----YELAKElpl---eiKEVHLDVTHGLN-YLTFFTVRVVQELLGILsi-----rkGVVLKTYSSDPfv 167 Pyrococcus hori...
Q6L309       134 DIKFLYSYFY----VSILKSieff-ndiDTFLIDTTHGVN-FMQLIFTESVRHACNTYsln---yrrNIKLEFYNSDPyy 204 Picrophilus tor...
Q97CI8       116 DINYIYSYFY----RSILNYlesv-dkiNKIIVDITHGIN-FLEFIFLESLMYALRVYals---nkiDVNIEYYNSDPys 186 Thermoplasma vo...
Q6L308       104 YPQEIMLFIF----LDMLKRin----adDILLLDINTGLNeYVNLLIDAATNLFVALWlfni-nnekSLRIYKIISEPvl 174 Picrophilus tor...
YP_001178890 131 SYDDIVLEIL----FDMIERymk--ediDEIYLDISSGHNiYISAMIEASRHFAVLTKlmhwiheekRPSIYVVFSDPim 204 Caldicellulosir...
2I71_B       189 kd------vsdtVKLHEIEAIKIsp--lSGLKYVTyqilnkdknff------------------------nkifsdsvna 236 Sulfolobus solf...
Q972U4       183 l---------vpLFVKDFKKVRIydyltTNIKLSKekgfst----------------------------------qgkse 219 Sulfolobus toko...
O66700       202 grn-----iqkpLRINEIEYYSSif-pnLVVYRIKkedkeceqileaydd-----------------sineigdnmkler 258 Aquifex aeolicus
Q59060       176 gr------ekeiLNIHTVEDVIIkp--sYDIKGMTldfldatkfvdkkeigkik--------keinmnpkikelrimkqn 239 Methanocaldococ...
Q8U1S8       203 lgvsqeiredtiLHIREIGEGVVrp--rPQYSPVEgkl-----------------------------------------y 239 Pyrococcus furi...
O57907       168 dg------svrhLRVNLIEEATIdp--kPLSEFLEgkflvnysmdrvefge---------------iarrlkakeldlgr 224 Pyrococcus hori...
Q6L309       205 ks------ddtiLNINTIKIDLIds--kNILSVISrdflnkykdnknsik-----------------nyfkkinrdglei 259 Picrophilus tor...
Q97CI8       187 n--------faiLNIYKIKSIEIey--kNVLSIISrdfinmyrhnkkdik-----------------dyfklnfnedlsd 239 Thermoplasma vo...
Q6L308       175 kg-------skkVSIYIQSLNKKa---fFLVPYKKefkiasvmemnddlkm---------------sfefkfkhkrnyrn 229 Picrophilus tor...
YP_001178890 205 gs------saktFEIHIQPQSYTaf-fsSPISKKEacdhnfsflrniyqepqddtkgnnkvlqkqqirqkrkalkekiem 277 Caldicellulosir...
2I71_B       237 iPRFATALDNGLFiylse--kdsslHLKRLEddls----------------kdpLLTPSE-NEINVVYkdXKYALSHALF 297 Sulfolobus solf...
Q972U4       220 iYGLGKSLELGFPliliy--llknaNKLVPPdefekmiin-----smkvnkgekYEIVTN-FEAHETA--PYYFIGYHFV 289 Sulfolobus toko...
O66700       259 eHIFLSAIIHGTPlyilt--ympssKDLKAKidnaagyyek---niiieneigeKKIKVK-RKLRFTEnyITMLKAYFLS 332 Aquifex aeolicus
Q59060       240 iNAFIASIVYALPlvyst--ffvkkDKIEIYlneligaf-------isnikinpEDKILK-RYLYFGEgfNSLVKAYFAS 309 Methanocaldococ...
Q8U1S8       240 wNAFISSVANGFPlvfas--fypniRDVEDYlnkkleeflv----gievgeredGKPYVK-REKALDRsfKNASKLYYAL 312 Pyrococcus furi...
O57907       225 iNSWIASLKHGLPlvftt--mypqeGEVEGVledvvak---------flegfnvGEGKVV-RSISLGKdfGSLAKLYFQL 292 Pyrococcus hori...
Q6L309       260 yIKACSIMVQSDIipylly-vidnkHQCFNIdqennfsitik-ndgnlinvqqdFPDSIK-INIESLAfiDSLRAVYNSM 336 Picrophilus tor...
Q97CI8       240 yIKACSIMAQSVTvpylmyliiniyKKIYEIgsgglevhln----iednkirqtFDNKIN-VNIETLAflDTLIKINSSI 314 Thermoplasma vo...
Q6L308       230 lINNVIIIYNSIDmntlsv-lkesyNKLFSDsvfydlkcsikelidnfsdllnnMDGGRNiKILNVNEiiNFILTLYLYC 308 Picrophilus tor...
YP_001178890 278 fTILFSAIKNNVPlylyyh-tyhsiDEIKNElvnl---------------inhaKDQLIKdFEVSPKLnkKAYLDAIFSL 341 Caldicellulosir...
2I71_B       298 YVISRfsg--------------nvdLDTLRHYAEtyadk---------vtraiIENEVDKIEKYqxgserkllge----- 349 Sulfolobus solf...
Q972U4       290 NSYKKiaee------------seisLESLEKLLElfeep----------qrklIIREIEILKDFsrlmkdeeehlldyli 347 Sulfolobus toko...
O66700       333 FILEKkgfsk----------keevlLEDINKLNEmifref-------pvlkhrISKETNNINERrdnipedfliyr---- 391 Aquifex aeolicus
Q59060       310 KISEIpqlik-----------delsLEEIDELKNtlfken--------pnsqyIKNEISSLYNIintkykeeelseilgn 370 Methanocaldococ...
Q8U1S8       313 RVFNTkfqnyp---------kkevpIEEIMEISKifeslp--------rigiiLERQVEWLRNLvygrlwyengeqkikk 375 Pyrococcus furi...
O57907       293 RVLKDlkemynl-------pkdeasVEELLKISEeiftg---------rikhsTKVELDNVANRvektegwvkls----- 351 Pyrococcus hori...
Q6L309       337 KSHNKy------------------nIKDIYDLTDiffgrd--------sditfLKNELKNIKNNkmrthgr--------- 381 Picrophilus tor...
Q97CI8       315 KYDNGf------------------kIPDIYTFTDnffsre--------synifIKNELRKIKSKkehydf---------- 358 Thermoplasma vo...
Q6L308       309 GFFKLfkd--------------kihLEKLDDYLElgnliynnkkinlpqnirfLTRDIQEFKEMannnvssyynkedp-- 372 Picrophilus tor...
YP_001178890 342 CFYMGivevlerynitmfcqqtgfdLEKLGQTFAqiytifgip-mnytmlgneISNDTEKIQQHgeidkwtrlrki---- 416 Caldicellulosir...
2I71_B       350 ------------------------------------------yxkvegkgfdKRILYAHGGLPYAGt--yVYKEKd--KV 383 Sulfolobus solf...
Q972U4       348 rigna--------------------------rvidwmkgevsedekeecdvnEDEMYSHAGLGRKFtk-iMVKEG---KI 397 Sulfolobus toko...
O66700       392 -----------------------------------------einrrgnrdfeERNFFAHAGFEYNSv--mLKKDDk--DI 426 Aquifex aeolicus
Q59060       371 ------------------------------------wtpiykirrenidkfkIRNFLAHAGFEKSVteiyISVENkngKI 414 Methanocaldococ...
Q8U1S8       376 glleiikdkkdkrkeaealkkgktislaeaakltrifspsgerietiespnvVRNFIAHSGFEYNIv--yVKYDRlsdRL 453 Pyrococcus furi...
O57907       352 -----------------------------------------effknanpqvdPRNFFAHAGLEANLv--eVKRNG---EL 385 Pyrococcus hori...
Q6L309       382 ---------------------------------------------yidlsefTRNFKAHAGLLDYI----CNVDSn--CI 410 Picrophilus tor...
Q97CI8       359 -----------------------------------------------dignfSRNFKAYAGLLDGLy---VLKDN---SI 385 Thermoplasma vo...
Q6L308       373 --------------------------------------efknesdknghgdmERNFFAHSGLDRES----VDIKGd--KI 408 Picrophilus tor...
YP_001178890 417 ----------------------------------------vdpvksisdepdERNFFAHSGLEGNVt--eVRYDGe--KV 452 Caldicellulosir...
2I71_B       384 YVTY 387 Sulfolobus solfataricus
Q972U4       398 VVKY 401 Sulfolobus tokodaii
O66700       427 ILKV 430 Aquifex aeolicus
Q59060       415 ELSE 418 Methanocaldococcus jannaschii
Q8U1S8       454 YFFY 457 Pyrococcus furiosus
O57907       386 YLRY 389 Pyrococcus horikoshii
Q6L309       411 EFKT 414 Picrophilus torridus
Q97CI8       386 DFKT 389 Thermoplasma volcanium
Q6L308       409 IYKS 412 Picrophilus torridus
YP_001178890 453 YVRY 456 Caldicellulosiruptor saccharolyticus DSM 8903
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