2I0X,2IVY,1ZPW


Conserved Protein Domain Family
Cas2_I_II_III

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cd09725: Cas2_I_II_III 
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CRISPR/Cas system-associated protein Cas2
CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold
Statistics
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PSSM-Id: 187856
Aligned: 120 rows
Threshold Bit Score: 29.3757
Created: 1-Oct-2008
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2I0X_A         3 IVVVYDVg------vERVNKVKKFLRMhlNWVQNSVFEGevtLAEFERIKEGLKKIidensDSVIIYklr--smpPRETL 74  Pyrococcus furi...
Q3VN72         3 VLVTYDVntetpagkRRLRRIAKTCQNygQRVQFSVFECnvdPAQWTKLRGKLVHEmdhdhDSLRFYflg--snwQNHIE 80  Pelodictyon pha...
Q2J7N8         3 LLVTYDVdtttpdgnRRLRKVAKICEGhgIRVQKSVFEIvctEPQRVLLEHKISQVidetlDSIRIYqmpqhtldNVHHL 82  Frankia sp. CcI3
YP_001112368  13 MLITYDVntttdagkKRLRRVAKQCINygQRVQNSVFEClldPAQFAELKNTLEEIidkekDSLRYYylg--snwKKRIK 90  Desulfotomaculu...
Q41C11        32 VLITYDVntvspggkKRLRHVAKLCQRygQRVQNSVFECivdQTEFMLLKLRLKEIinherDSLRFYklgnqyisKVEHY 111 Exiguobacterium...
Q5WBY6        36 VLITYDVqtsslggsKRLRKVAKACQNygQRVQNSVFECivdSAQLTSLKLELSSLidkekDSLRIYrlgnnyksKVEHI 115 Bacillus clausi...
Q0AZN8         3 VLITYDVnttdkdgqKRLRKVAKKCVDygQRVQNSVFECllePAQFVMLKNELEAIidankDSLRYYmlgsnwkrRVEHV 82  Syntrophomonas ...
Q18XT2         1 MLITYDVntqtaagrKRLRQVAKQCVNygQRVQNSVFECvldAAKFREVQHKLEQIidtetDSLRFYmlgnnyknKVEHI 80  Desulfitobacter...
NP_269627      3 VLVTYDVntetpagrKRLRHVAKLCVDygQRVQNSVFECsvtPAEFVDIKHRLTQIidektDSIRFYllgknwqrRVETL 82  Streptococcus p...
YP_001278617   3 VLITYDVnteteagkRRLLKVAKACQDygQRVQKSVFECiidAAQLRQLQARLERIidvetDSIRYYylgdewrhRVRHV 82  Roseiflexus sp....
2I0X_A        75 --GIEK 78  Pyrococcus furiosus
Q3VN72        81 heGAKE 86  Pelodictyon phaeoclathratiforme BU-1
Q2J7N8        83 gaGVQP 88  Frankia sp. CcI3
YP_001112368  91 hvGAKE 96  Desulfotomaculum reducens MI-1
Q41C11       112 --GIKS 115 Exiguobacterium sibiricum 255-15
Q5WBY6       116 --GAKP 119 Bacillus clausii KSM-K16
Q0AZN8        83 --GAKE 86  Syntrophomonas wolfei subsp. wolfei str. Goettingen
Q18XT2        81 --GAKP 84  Desulfitobacterium hafniense DCB-2
NP_269627     83 --GRSD 86  Streptococcus pyogenes M1 GAS
YP_001278617  83 --GVAP 86  Roseiflexus sp. RS-1
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