Conserved Protein Domain Family
CsaX_III-U

?
cd09724: CsaX_III-U 
CRISPR/Cas system-associated protein CsaX
CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; No prediction
Statistics
?
PSSM-Id: 187855
Aligned: 3 rows
Threshold Bit Score: 454.774
Created: 7-Feb-2010
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
REF_jgi:Msed_1139  30 LEIPDNRFLDVMQLASSLARGKEEERRKriektkk-------iegilrILPLSGNDKKPFEQALSCLNIPTQSTISEILG 102 Metallosph...
NP_342881          31 VEIEDDELRNVLNLAYKIAKNNEDAAAErrgkakkkkgeegetatsnlIIPLSGNDKNPWSETLKCYNFPTTVALSDVFK 110 Sulfolobus...
NP_378654           9 LEIDDKELRIALDTASDIAQKFEKDNKR--------------------PIPLNANDKKVMEKILKCFNFSSSDPISYVLK 68  Sulfolobus...
REF_jgi:Msed_1139 103 KANPDMakkECQKVSAPSFVKPEMYEYGKYPGY-RGSTKVEVKVDPVYLVVAVAGWVISRLGEAMISnSDRVGIHLFPVS 181 Metallosph...
NP_342881         111 NFSQVN---ECEEVSAPSFVKPEFYEFGRSPGMvERARRVKLEVEPHYLIIAAAGWVLTRLGKAKVSeGDYVGVNVFTTT 187 Sulfolobus...
NP_378654          69 NFNIEQs-kECYVDNVPSFIKPEYYEFVRIPGK-PGGQKMSVKVDSRYVILAIAGWLFSRIGYARVG-GETIGVNVFTLT 145 Sulfolobus...
REF_jgi:Msed_1139 182 VDRQFsvlpslvkdSPLIPGFYPSTAFLLWLAYQMVSRk-AEIRSGINIYAVSDAGGQSPTTVVGGFTTSVERLLENKIF 260 Metallosph...
NP_342881         188 RGILYsli---qnvNGIIPGIKPETAFGLWIARKVVSSvtNPTVSVVRIYTMSDAIGQNPTTINGGFSIDLTKLLEKKDL 264 Sulfolobus...
NP_378654         146 KSMLYn-------tYGQFSGVKPETAFIFLLADRVIKS--GSNISSARVYLMSDAGGQNPTVILGGFSIDFSKLLEKKEL 216 Sulfolobus...
REF_jgi:Msed_1139 261 RDEQAYAve-----------aVTREALRYDSGKRDYAIRISNLLYEVLMGSRRSEELMYFANRELlsiNLTKSKEDKRLY 329 Metallosph...
NP_342881         265 LTERLEAiarnalsissnmreIARNALSISSNMRERYIVLANYIYEYLTGSKRLEDLLYFANRDLi-mNLNSNDEKVRDL 343 Sulfolobus...
NP_378654         217 IDDDLIR--------------LAQDATNDQSPTNDFSARIVELVYEVIGGAKRVEDLVYLANRYVs-mEITNAKEFCKNN 281 Sulfolobus...
REF_jgi:Msed_1139 330 E 330 Metallosphaera sedula DSM 5348
NP_342881         344 K 344 Sulfolobus solfataricus P2
NP_378654         282 R 282 Sulfolobus tokodaii str. 7
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap