Conserved Protein Domain Family
Cas5_I
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cd09716: Cas5_I 
CRISPR/Cas system-associated RAMP superfamily protein Cas5
CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex
Links
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Statistics
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PSSM-Id: 187847
Aligned: 3 rows
Threshold Bit Score: 167.155
Created: 11-Jan-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
NP_906087  40 IKLHIEPHAPISMVSelPGSYYKALLYPDKHILCGLFENVLGWHFSRKDREIITKEIKNirkktkkgyipptirsiFIPL 119 Porphyromonas ging...
AAQ66986   40 IKLHIEPHAPISMVSelPGSYYKALLYPDKHILCGLFENVLGWHFSRKDREIITKEIKNirkktkkgyipptirsiFIPL 119 Porphyromonas ging...
EFV03213   22 VTLGIQPLAPLSMVSemPGSYYKSMRFPNQKMICGLFENILGWHIDLPLRISIFKAYKSiretqgletvnyvsgstYLPL 101 Prevotella salivae...

NP_906087 120 LSDFFeldsvrivstdspffYNDLWKRAFRRkdagkiHFGGTQNIDYTLVMDKfrfmcENERTLETEEKTDQke-----e 194 Porphyromonas ging...
AAQ66986  120 LSDFFeldsvrivstdspffYNDLWKRAFRRkdagkiHFGGTQNIDYTLVMDKfrfmcENERTLETEEKTDQke-----e 194 Porphyromonas ging...
EFV03213  102 LMDYFsivekpriklqryciYKDLWSRNYRRena-fvHLDGSRNLDINIITEKnn-lyEDLLYKIKNKELDKlganskke 179 Prevotella salivae...

NP_906087 195 KFLRENIDRISFFYTTPTNREYLFFEGNYECVIKmdpqlvdllsktlpqqnmGYLGNSEGWVTLY 259 Porphyromonas gingivalis W83
AAQ66986  195 KFLRENIDRISFFYTTPTNREYLFFEGNYECVIKmdpqlvdllsktlpqqnmGYLGNSEGWVTLY 259 Porphyromonas gingivalis W83
EFV03213  180 AWIKKHMGGIPFFYTTPTSREFIVMEGSFEFSLLidnrllgllhdhlscnniGYLGTSEGWVNIT 244 Prevotella salivae DSM 15606
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