Conserved Protein Domain Family
Csp2_I-U

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cd09715: Csp2_I-U 
CRISPR/Cas system-associated protein Cas8c
CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Predicted Cas8 ortholog
Statistics
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PSSM-Id: 187846
Aligned: 3 rows
Threshold Bit Score: 812.231
Created: 7-Feb-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
NP_906086         5 HYYIRYGCAITLYDNHVSERERLTpkeLRFSIEKAVSSFRIQAQEPFSPGSKARFSFvkrKDGNTKNGIFLSPHIVTKDM 84  Porphyromona...
tigr_BBFORF0146   1 HPYIRYAQALLMVENNLSSINEITlehIKNEIEKGLNSFRVRPSGSIAGKSKVQYVFdriEKGDTKKGVFLSPNTISSDK 80 
EFV03214          5 HPYIKYAQALLIEENNLESIEDIThnhIKQELAKGLDTFSLKPIKDFVGKEKVKYSFv-sEKNDAKHFVYLSPNIISTEM 83  Prevotella s...
NP_906086        85 HAQKVWTKASKfleidylgkdnerEGLLKKDNVSMSNIPISGEYLTFGEK-DTGRGSAKISVEEQTYGLITTLTPLKPAL 163 Porphyromona...
tigr_BBFORF0146  81 QARNLWGAAAKflqgm---dndkcDDLSKNTEIGMSEVPISGEFLSFSDKgNIGRGKPKSSIKEQGFGIISTLTPLKPCF 157
EFV03214         84 KASNIYKFLRKdi----------dEDLQKSCKVSQSVMPIVGEYCTFSNKgIVGRGKPTSTIYEECLAAITTVTTLKPCL 153 Prevotella s...
NP_906086       164 Q--VGKD------NFCIIPDIPLNQMVDFIALFDKMQITHLSGEAMLGNI-----DNKGi-----PHRPKIFRGNFPNSP 225 Porphyromona...
tigr_BBFORF0146 158 QykIGKKgqpemfNVCIIPDLPIVEMVNFIRVFKQMRIQKLNGDLLTGDVvt-qtDKQGkikdisPKRPLIYNGNFPNPP 236
EFV03214        154 Q--SGKE------NICIIPDLEVENLIDFIKLFKRISLVNSESDLMEGVVvktskRGKGkdi-yiPKRPKIFRGNFPNAP 224 Prevotella s...
NP_906086       226 KSDRMGAIALLGAIGEFAKHAEFSTLAQKVLDSLKGSTLYLITYGNAIPFTFHHYIIDLAKEGKLHSIVDSLFYsr---- 301 Porphyromona...
tigr_BBFORF0146 237 KSSALGSVSLLGAIGEFAKQAEVSDRALGVLESLKKATMYMVKYGNATTFTYNHYIVDMAKKAKLRTVIDSLYYsk---- 312
EFV03214        225 RSPALCSVALLGTIGEMVKNSDTSLLAKRVIKCLENTDIYTVSYGNASVFTYNHYIIQLASKGSLRKIVDSIYWcnlyky 304 Prevotella s...
NP_906086       302 ----lyKKEKRVYGDTDYDRFDFFTNRFLQSFNKAAFDDFFSSRVEYPnqikILFQMFFTKMEKLKTDVIASAQILGSWL 377 Porphyromona...
tigr_BBFORF0146 313 ----lfNQDRRSSINTEYQKFDLFTSRFLQLFTQPAFKDFLSFRAEYPeqvqLLLNIYFVKMERIDAEIVTSARQLGKWL 388
EFV03214        305 vdrekyNPNEVVEKTKDYEVFDLFAGRFLQLFNRPAFKDFLSFRAEYPadlkLLLTTYFENMEKIDAKVVVSAKELGSWL 384 Prevotella s...
NP_906086       378 NQVAYFAAKeeadsRISPGNIFEE----KAKFLVMMESSIYAAKRGDALIAQILILAGRLSKNEAPKEALLFMEKTITGE 453 Porphyromona...
tigr_BBFORF0146 389 NLVAYFAAKse--vREGANNYWEEirkvKSKVLVELESSTFAAKSGDALVAQVITRAGRLSGMDAPESASLFMEKTMSGD 466
EFV03214        385 NGVAYRAAKkm--lREEGKSSDEElrktKAKFLVELESSAFAAKSGDALIAQVITRAGRLSGSDAPSEASLFMEQAISGE 462 Prevotella s...
NP_906086       454 IDLSVAKNLLIAYMRIR 470 Porphyromonas gingivalis W83
tigr_BBFORF0146 467 LPLDCAKNLLIAFSRLR 483
EFV03214        463 LELSKAKNLLISFSRLR 479 Prevotella salivae DSM 15606
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